Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC034244.1-201ENST00000507687 207 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 EIF3KP3-201ENST00000514461 639 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AP000926.4-201ENST00000527351 454 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC079064.1-201ENST00000528365 362 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 MTCO2P15-201ENST00000532655 656 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC095055.1-201ENST00000603472 1113 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC093388.1-201ENST00000609166 430 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC015922.4-201ENST00000612568 690 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC131159.1-201ENST00000621854 213 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC073869.8-201ENST00000641806 335 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AL356317.1-201ENST00000396110 1436 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC004158.1-201ENST00000564508 4319 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC107027.3-201ENST00000565095 3473 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC131971.1-201ENST00000332881 1482 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC007382.1-201ENST00000624376 2618 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AL078621.3-201ENST00000623707 2042 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC104454.1-201ENST00000421341 1401 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 SNORA17.1-201ENST00000362945 126 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 RNU6-1251P-201ENST00000364502 107 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 RNU4-7P-201ENST00000364758 141 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 SNORD116-12-201ENST00000384468 92 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 RNA5SP296-201ENST00000410523 111 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC092651.1-201ENST00000426110 312 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 MTND1P20-201ENST00000430341 950 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AL772161.1-201ENST00000439130 476 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC000041.1-201ENST00000439655 175 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC092685.1-201ENST00000447960 1243 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC073850.1-201ENST00000449243 255 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AZGP1P2-201ENST00000454506 345 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 RN7SL97P-201ENST00000486780 299 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 RPS17P5-201ENST00000498293 408 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC097486.1-201ENST00000515331 210 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 YWHABP2-201ENST00000540201 713 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AP002373.2-201ENST00000541631 1060 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 OR11J2P-201ENST00000555298 907 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 SULT1C2P2-201ENST00000562517 294 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AP005136.1-201ENST00000579765 429 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 RN7SL708P-201ENST00000580952 299 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 FAM106CP-201ENST00000582212 507 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC006116.3-201ENST00000592968 361 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 TAS2R6P-201ENST00000605022 826 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC024060.1-201ENST00000607052 494 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC007349.4-201ENST00000608114 532 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 HULC.1-201ENST00000612720 240 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC092608.3-201ENST00000625017 386 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 LINC02211-204ENST00000642024 1070 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 KYNUP3-201ENST00000574386 1341 ntBASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CTDP1Q9Y5B0 SOCS5P3-201ENST00000425115 1576 ntBASIC6.19□□□□□ -1.42
CTDP1Q9Y5B0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms