Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 EIF4A1P1-201ENST00000420241 934 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 GAPDHP49-201ENST00000421421 961 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 RPL7AP14-201ENST00000424041 802 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 RPS4XP16-201ENST00000427198 791 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 RPL23AP50-201ENST00000434149 455 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 TVP23CP1-201ENST00000450317 639 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC068228.1-201ENST00000461723 211 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC021660.1-201ENST00000465006 554 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC091959.2-201ENST00000477363 321 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AL163540.1-201ENST00000485382 386 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC073358.1-201ENST00000505671 684 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC022447.3-201ENST00000506865 495 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC010486.1-201ENST00000511793 424 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 SNORA19.2-201ENST00000516013 114 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 SCARNA5-201ENST00000516201 276 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 ARL2BPP5-201ENST00000523141 481 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 MIR4301-201ENST00000577203 66 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC011712.1-201ENST00000588959 234 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC011497.2-201ENST00000600255 639 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 RARSP1-201ENST00000542842 1418 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PDZRN3Q9UPQ7 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AL132640.2-201ENST00000559968 1698 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 Y_RNA.166-201ENST00000363730 102 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 SNORD42.2-201ENST00000365570 69 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 RNU6-639P-201ENST00000384074 107 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 RNU1-46P-201ENST00000384425 164 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 RNU6-297P-201ENST00000384636 107 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 HMGN1P20-201ENST00000411849 300 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 ATP5F1P1-201ENST00000433775 569 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 PNKDP1-201ENST00000435914 430 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 SDCBPP1-201ENST00000440192 890 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC006480.1-201ENST00000449887 378 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 Y_RNA.631-201ENST00000459607 101 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AP002453.1-201ENST00000492327 668 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 OR7E99P-201ENST00000505750 922 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC010587.2-201ENST00000511727 448 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 SEPT14P4-201ENST00000513445 186 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 COX6B1P4-201ENST00000519826 484 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC092747.2-201ENST00000545069 983 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 MED21-206ENST00000546323 575 ntTSL 3 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 CR383656.6-201ENST00000550518 394 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AL161670.1-201ENST00000554348 137 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC234782.5-201ENST00000617723 324 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 DLEU1_2.1-201ENST00000617920 342 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 AC006213.6-201ENST00000623722 4179 ntBASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.25□□□□□ -1.09
PDZRN3Q9UPQ7 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms