Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4AQ9UN37 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 SAMMSON-213ENST00000641336 1521 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AL606537.1-201ENST00000607258 2011 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 RNU4-2-201ENST00000365668 141 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 RNU6-185P-201ENST00000384421 107 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 RNY3P9-201ENST00000384727 106 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 MIR142-201ENST00000384835 87 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 DNAJC19P6-201ENST00000401853 280 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AL589647.1-201ENST00000402485 466 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 GAPDHP42-201ENST00000406848 981 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 TCEA1P4-201ENST00000415066 844 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 RPS3AP37-201ENST00000419176 745 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 VN1R54P-201ENST00000435210 1049 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 RPL21P133-201ENST00000443666 476 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 FTH1P2-201ENST00000466086 412 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC079203.1-201ENST00000487972 404 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC072052.1-201ENST00000496556 306 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 HPRT1P2-201ENST00000505250 544 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC022832.1-201ENST00000530718 645 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 OR5D15P-201ENST00000531671 942 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 MIR4646-201ENST00000580775 63 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 PCNAP1-202ENST00000595299 752 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC013468.1-201ENST00000608680 598 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AL356274.1-201ENST00000617064 410 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.23□□□□□ -1.57
VPS4AQ9UN37 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4AQ9UN37 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 RNU6-543P-201ENST00000362576 108 ntBASIC5.22□□□□□ -1.57
VPS4AQ9UN37 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS4AQ9UN37 RNU6-532P-201ENST00000384318 107 ntBASIC5.22□□□□□ -1.57
VPS4AQ9UN37 MIR765-201ENST00000390226 114 ntBASIC5.22□□□□□ -1.57
VPS4AQ9UN37 RNU6-1242P-201ENST00000391052 103 ntBASIC5.22□□□□□ -1.57
VPS4AQ9UN37 PPIAP9-201ENST00000403866 498 ntBASIC5.22□□□□□ -1.57
VPS4AQ9UN37 AC002524.1-201ENST00000411687 547 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms