Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RPL21P12-201ENST00000559810 515 ntBASIC4.38□□□□□ -1.71
CHD7Q9P2D1 AC091178.1-203ENST00000584586 279 ntBASIC4.38□□□□□ -1.71
CHD7Q9P2D1 AL137843.1-201ENST00000605078 385 ntBASIC4.38□□□□□ -1.71
CHD7Q9P2D1 AC015722.2-201ENST00000622210 551 ntBASIC4.38□□□□□ -1.71
CHD7Q9P2D1 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 AC104849.1-201ENST00000462623 405 ntBASIC4.38□□□□□ -1.71
CHD7Q9P2D1 MYL12BP2-201ENST00000503948 512 ntBASIC4.38□□□□□ -1.71
CHD7Q9P2D1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 AL122016.1-201ENST00000403365 367 ntBASIC4.37□□□□□ -1.71
CHD7Q9P2D1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 AL049874.2-201ENST00000492636 288 ntBASIC4.37□□□□□ -1.71
CHD7Q9P2D1 UBE2CP3-201ENST00000502715 450 ntBASIC4.37□□□□□ -1.71
CHD7Q9P2D1 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 EOGT-210ENST00000615922 1931 ntBASIC4.37□□□□□ -1.71
CHD7Q9P2D1 AL138721.1-201ENST00000616756 179 ntBASIC4.37□□□□□ -1.71
CHD7Q9P2D1 AL592182.3-201ENST00000642132 3304 ntBASIC4.37□□□□□ -1.71
CHD7Q9P2D1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 ZNF812P-201ENST00000457674 1694 ntBASIC4.37□□□□□ -1.71
CHD7Q9P2D1 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.37□□□□□ -1.71
CHD7Q9P2D1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 AL139099.1-201ENST00000497398 403 ntBASIC4.37□□□□□ -1.71
CHD7Q9P2D1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 AL049634.3-201ENST00000604968 457 ntBASIC4.37□□□□□ -1.71
CHD7Q9P2D1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHD7Q9P2D1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 AL022323.4-201ENST00000623980 13120 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 RNVU1-14-201ENST00000384770 164 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 SNORA57.3-201ENST00000411095 141 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 RPL23AP94-201ENST00000512518 302 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 AC006349.1-201ENST00000555526 235 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 CYCSP40-201ENST00000575927 294 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 AL160290.3-201ENST00000604869 165 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 AC236972.1-201ENST00000433225 199 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 RPS29P2-201ENST00000479278 136 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 KRT19P6-201ENST00000510983 209 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 AL031985.2-201ENST00000600955 480 ntBASIC4.36□□□□□ -1.71
CHD7Q9P2D1 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHD7Q9P2D1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AC068993.1-201ENST00000546724 589 ntBASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AC008481.1-201ENST00000463278 396 ntBASIC4.35□□□□□ -1.71
CHD7Q9P2D1 RPS3AP6-201ENST00000484430 795 ntBASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AC108145.1-201ENST00000503770 153 ntBASIC4.35□□□□□ -1.71
CHD7Q9P2D1 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AC092354.2-201ENST00000607786 514 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms