Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 UBE2NP1-201ENST00000545592 458 ntBASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 AC126177.5-201ENST00000549599 178 ntBASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 AC074051.3-201ENST00000570238 358 ntBASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 AC126915.2-201ENST00000610957 190 ntBASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 AC024595.1-201ENST00000623088 387 ntBASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDLIM7Q9NR12 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 RN7SKP103-201ENST00000363848 320 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 snoZ40.1-201ENST00000364540 72 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 RNU6-920P-201ENST00000410926 92 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 USP9YP33-201ENST00000412220 421 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AL807761.1-201ENST00000417622 171 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC092651.1-201ENST00000426110 312 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 Z74696.2-201ENST00000436514 498 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 RPL5P13-201ENST00000462840 709 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC079080.1-201ENST00000479841 822 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 ARL4AP1-201ENST00000503220 705 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 CCNG2P1-201ENST00000549521 1000 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 CR383656.6-201ENST00000550518 394 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 HNRNPCP1-201ENST00000556181 766 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC116553.2-201ENST00000564203 463 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC107982.3-201ENST00000584957 985 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AL133481.2-203ENST00000607558 139 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 AC121761.2-201ENST00000617300 689 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 LINC01963-201ENST00000562038 3148 ntBASIC6.32□□□□□ -1.4
PDLIM7Q9NR12 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 AC034229.2-201ENST00000566945 2508 ntBASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PDLIM7Q9NR12 OR56B2P-201ENST00000317102 954 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms