Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL121657.1-201ENST00000327215 531 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 Z98745.1-201ENST00000402553 494 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 GAPDHP49-201ENST00000421421 961 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AL157831.1-201ENST00000426134 473 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 OR4C10P-201ENST00000434991 931 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 TBCAP1-201ENST00000436520 327 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 PHBP16-201ENST00000446318 950 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AC114755.5-201ENST00000447760 831 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AL162591.2-201ENST00000449634 317 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AC008958.1-201ENST00000511047 682 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AC134698.5-201ENST00000519444 336 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AP001804.2-201ENST00000533932 910 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AL109766.1-201ENST00000555080 552 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AC007224.1-201ENST00000564410 144 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 NXPH1-205ENST00000602349 1953 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AL132656.3-201ENST00000606384 1595 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AC016717.3-201ENST00000624730 554 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 AL078595.2-201ENST00000605309 1780 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 NEAT1-202ENST00000501122 22743 ntBASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 MIR134-201ENST00000385258 73 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 RPS4XP12-201ENST00000461747 709 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 AC091167.1-201ENST00000492017 396 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 MRPL49P2-201ENST00000521066 465 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 AC233702.9-201ENST00000581528 203 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 OR5P1P-201ENST00000299512 925 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 OR8G2P-201ENST00000412796 908 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 NDUFA5P1-201ENST00000433858 341 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 RPL23AP97-201ENST00000568955 471 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 RPL7P50-201ENST00000600588 727 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 AP005019.3-201ENST00000620418 560 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 LINC01808-202ENST00000641680 1116 ntBASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KIAA1549Q9HCM3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AC067945.1-201ENST00000342609 618 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RNA5SP22-201ENST00000365393 109 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RNA5SP366-201ENST00000365454 123 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RNU1-44P-201ENST00000384453 163 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 MIR1193-201ENST00000408109 78 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RN7SKP263-201ENST00000411194 309 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms