Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL513533.1-201ENST00000453728 415 ntBASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 AC022795.1-201ENST00000473808 480 ntBASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 IGLV2-34-201ENST00000490007 283 ntBASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 AC007066.2-202ENST00000566531 914 ntBASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 AC007546.2-201ENST00000623996 360 ntBASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 AL596275.2-204ENST00000641628 552 ntBASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 AL596275.2-206ENST00000641957 626 ntBASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 OR14L1P-202ENST00000641545 3009 ntBASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRTM1Q9HBL6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 AC067945.1-201ENST00000342609 618 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 RPL32P3-201ENST00000359025 275 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 RNA5SP307-201ENST00000362863 116 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 RNU6-398P-201ENST00000384143 109 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 RN7SKP27-201ENST00000410684 333 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 SKP1P3-201ENST00000429280 487 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 AC006967.1-201ENST00000467608 589 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 RPS26P28-201ENST00000470806 348 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 AC011005.3-201ENST00000491624 395 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 C1GALT1P3-201ENST00000522049 819 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 AL160290.3-201ENST00000604869 165 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 LINC01808-202ENST00000641680 1116 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRTM1Q9HBL6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 OR51C1P-202ENST00000641159 1444 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AL139039.2-201ENST00000407436 479 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 VN1R8P-201ENST00000407739 893 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 SNORA74C-2-201ENST00000411179 201 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AC119751.6-201ENST00000416712 186 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AL034379.1-201ENST00000423216 253 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AC073335.1-201ENST00000427776 363 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 YWHAZP2-201ENST00000440317 728 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 RPL23AP43-201ENST00000446445 471 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 RPS23P7-201ENST00000466210 444 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 RNA5SP497-201ENST00000516081 97 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 HMGB1P19-201ENST00000517578 577 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 IGLV3-26-201ENST00000520756 302 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 OR5M2P-201ENST00000529003 936 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AL121834.1-201ENST00000572284 509 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 RN7SL176P-201ENST00000580352 264 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 Z98200.1-201ENST00000607298 470 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 MIR6780A-201ENST00000615089 68 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 MIR7154-201ENST00000620673 73 ntBASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
LRTM1Q9HBL6 VN2R3P-201ENST00000422626 1412 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 396.5 ms