Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 EOGT-210ENST00000615922 1931 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC135352.1-201ENST00000506173 1418 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC108751.5-201ENST00000492880 1336 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
LRRC40Q9H9A6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
LRRC40Q9H9A6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 SNORA74A-201ENST00000364089 198 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 MIR195-201ENST00000385194 87 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 CEACAMP8-201ENST00000413902 580 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AC140479.3-201ENST00000418944 1126 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 PTMAP6-201ENST00000439110 327 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 ARL4AP3-201ENST00000441452 574 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AC108463.1-201ENST00000450258 347 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 HIGD1AP8-201ENST00000453927 274 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 EIF2S2P4-201ENST00000461070 984 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 PPIAP21-201ENST00000464473 501 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 RN7SL329P-201ENST00000467740 299 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 RPL23AP65-201ENST00000475608 468 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 RPL36AP41-201ENST00000493820 306 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 PGBD4P4-201ENST00000509673 613 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 RNU2-30P-201ENST00000516209 141 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 NPM1P6-201ENST00000521088 871 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 CYCSP28-201ENST00000534284 321 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 PCNPP1-201ENST00000552501 511 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AC105129.1-201ENST00000560250 297 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 PSMA6P4-201ENST00000603247 718 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AC090953.1-201ENST00000604305 1092 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AC133644.2-201ENST00000608142 540 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 CASC19-222ENST00000641321 1173 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 HSPD1P14-201ENST00000432666 1618 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AP001002.1-201ENST00000625148 1513 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 PHKBP1-201ENST00000450951 1951 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 MAPK10-304ENST00000641341 3984 ntBASIC4.71□□□□□ -1.66
LRRC40Q9H9A6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AC009229.4-201ENST00000623854 1947 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 RNU6-146P-201ENST00000384602 108 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AC092570.3-201ENST00000420113 693 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 VN1R54P-201ENST00000435210 1049 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AC005154.2-201ENST00000438110 379 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AL357520.1-201ENST00000441557 453 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 HMGB3P9-201ENST00000441799 583 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 TXNP2-201ENST00000443918 295 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 RNU6-1218P-201ENST00000458990 108 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 NDUFB5P1-201ENST00000508134 564 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AP001922.4-201ENST00000526967 290 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AC022882.1-201ENST00000532142 501 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AC090515.3-201ENST00000560431 315 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 MIR4737-201ENST00000583979 81 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 RN7SL52P-201ENST00000584271 284 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 RPL23AP61-201ENST00000623642 466 ntBASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRC40Q9H9A6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms