Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 BNIP3P10-201ENST00000605360 577 ntBASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 AC006065.6-201ENST00000625201 545 ntBASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 MIR30B-201ENST00000384850 88 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 ENSAP1-201ENST00000392855 326 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC017015.1-201ENST00000477387 286 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 U3.26-201ENST00000391236 204 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AL139099.1-201ENST00000497398 403 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC093591.2-201ENST00000565254 3843 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 LINC02035-201ENST00000610128 5476 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 HSPE1P12-201ENST00000412576 301 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC245052.5-201ENST00000416320 649 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC017083.1-201ENST00000428093 483 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 RPL21P8-201ENST00000465083 535 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC098799.3-201ENST00000506095 438 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 YPEL5P2-201ENST00000605553 359 ntBASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CSMD1Q96PZ7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AL691449.1-201ENST00000426570 421 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 MIR5684-201ENST00000585074 65 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 MTCO1P12-201ENST00000414273 1543 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 RNU6-213P-201ENST00000384051 104 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AC104164.2-201ENST00000496953 495 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AC079587.1-201ENST00000603846 277 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AC005972.3-201ENST00000606304 481 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 USP9YP4-201ENST00000424401 1745 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AL355852.1-201ENST00000454081 1771 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AC083899.2-201ENST00000423285 1376 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AC092111.2-201ENST00000611627 1414 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AL031119.1-201ENST00000404707 1879 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AC079809.1-201ENST00000415468 276 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 RPL21P43-201ENST00000425440 472 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 RPEP2-201ENST00000432149 701 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 RPS27AP1-201ENST00000475545 471 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 MTCO3P22-201ENST00000603219 784 ntBASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CSMD1Q96PZ7 AC027228.2-201ENST00000567141 2154 ntBASIC3.56□□□□□ -1.84
CSMD1Q96PZ7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms