Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC122688.1-201ENST00000541494 223 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 DPPA2P4-201ENST00000563717 878 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC023813.2-201ENST00000564321 469 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 MRPS21P7-201ENST00000566937 238 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AL121594.5-201ENST00000631724 573 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS50Q96JG6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS50Q96JG6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS50Q96JG6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VPS50Q96JG6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS50Q96JG6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS50Q96JG6 SRRM1P3-201ENST00000426911 2678 ntBASIC5.3□□□□□ -1.56
VPS50Q96JG6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AL731532.2-201ENST00000623542 1953 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 RNU6-543P-201ENST00000362576 108 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 RNA5SP30-201ENST00000365552 115 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 RNU1-74P-201ENST00000384108 171 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 MIR130A-201ENST00000385274 89 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 RPL23AP59-201ENST00000399415 461 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AL136310.1-201ENST00000404926 654 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AL034374.1-201ENST00000406329 351 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 VTA1P1-201ENST00000414044 866 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 TAF13P2-201ENST00000416876 286 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AP000936.3-201ENST00000438127 255 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC073465.2-201ENST00000440938 498 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 RPS11P7-201ENST00000442125 465 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 SETD6P1-201ENST00000444575 317 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AL050341.1-201ENST00000447743 313 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AL606490.1-201ENST00000452266 765 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AL035407.2-201ENST00000454090 378 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 RPS6P2-201ENST00000454208 705 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC004815.1-201ENST00000484185 331 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC091951.3-201ENST00000504093 246 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 DUTP7-201ENST00000507982 486 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC092593.2-201ENST00000513866 913 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC125612.1-201ENST00000547580 377 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 ZNF321P-202ENST00000550843 495 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 MIR4311-201ENST00000580794 100 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC069366.1-201ENST00000583159 838 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 MIR7853-201ENST00000584820 132 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC061975.8-201ENST00000587058 721 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC096553.1-201ENST00000605169 829 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC010245.2-201ENST00000606908 1167 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC009237.15-201ENST00000610252 501 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AP002967.1-201ENST00000624203 539 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AC090897.3-201ENST00000636973 1157 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 AL034549.2-201ENST00000618285 3373 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS50Q96JG6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS50Q96JG6 AL133268.1-201ENST00000405676 1401 ntBASIC5.29□□□□□ -1.56
VPS50Q96JG6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms