Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNED1Q8TER0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNED1Q8TER0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 RNA5SP130-201ENST00000364431 114 ntBASIC5.4□□□□□ -1.55
SNED1Q8TER0 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 AC009237.10-201ENST00000414112 510 ntBASIC5.4□□□□□ -1.55
SNED1Q8TER0 MFSD13B-201ENST00000420133 1290 ntBASIC5.4□□□□□ -1.55
SNED1Q8TER0 MTND2P9-201ENST00000422293 931 ntBASIC5.4□□□□□ -1.55
SNED1Q8TER0 Z74021.1-201ENST00000423610 407 ntBASIC5.4□□□□□ -1.55
SNED1Q8TER0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 DEFB109A-201ENST00000482450 265 ntBASIC5.4□□□□□ -1.55
SNED1Q8TER0 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 LINC01808-202ENST00000641680 1116 ntBASIC5.4□□□□□ -1.55
SNED1Q8TER0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.4□□□□□ -1.55
SNED1Q8TER0 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNED1Q8TER0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNED1Q8TER0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNED1Q8TER0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNED1Q8TER0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNED1Q8TER0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNED1Q8TER0 MIR670-201ENST00000390142 98 ntBASIC5.39□□□□□ -1.55
SNED1Q8TER0 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 AL157831.1-201ENST00000426134 473 ntBASIC5.39□□□□□ -1.55
SNED1Q8TER0 MRPS21P3-201ENST00000436696 262 ntBASIC5.39□□□□□ -1.55
SNED1Q8TER0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 RN7SL132P-201ENST00000478131 296 ntBASIC5.39□□□□□ -1.55
SNED1Q8TER0 FTH1P21-201ENST00000512179 511 ntBASIC5.39□□□□□ -1.55
SNED1Q8TER0 SNORA48.9-201ENST00000516419 162 ntBASIC5.39□□□□□ -1.55
SNED1Q8TER0 AC023632.4-201ENST00000517783 191 ntBASIC5.39□□□□□ -1.55
SNED1Q8TER0 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 AC138832.1-201ENST00000522871 556 ntBASIC5.39□□□□□ -1.55
SNED1Q8TER0 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 AC130352.1-201ENST00000602979 661 ntBASIC5.39□□□□□ -1.55
SNED1Q8TER0 BNIP3P41-202ENST00000616656 861 ntBASIC5.39□□□□□ -1.55
SNED1Q8TER0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SNED1Q8TER0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 AL022393.1-201ENST00000625142 1677 ntBASIC5.38□□□□□ -1.55
SNED1Q8TER0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 RPL21P65-201ENST00000406094 466 ntBASIC5.38□□□□□ -1.55
SNED1Q8TER0 ELOCP6-201ENST00000429066 328 ntBASIC5.38□□□□□ -1.55
SNED1Q8TER0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 ELOCP12-201ENST00000458706 328 ntBASIC5.38□□□□□ -1.55
SNED1Q8TER0 RPL23AP2-201ENST00000471227 466 ntBASIC5.38□□□□□ -1.55
SNED1Q8TER0 PARP4P3-201ENST00000510265 317 ntBASIC5.38□□□□□ -1.55
SNED1Q8TER0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 TRAV11-201ENST00000539512 339 ntBASIC5.38□□□□□ -1.55
SNED1Q8TER0 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 FAM27D1-201ENST00000612308 341 ntBASIC5.38□□□□□ -1.55
SNED1Q8TER0 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 AL356863.1-201ENST00000623378 1080 ntBASIC5.38□□□□□ -1.55
SNED1Q8TER0 AL356094.1-201ENST00000624663 1212 ntBASIC5.38□□□□□ -1.55
SNED1Q8TER0 AC012442.3-202ENST00000636742 206 ntBASIC5.38□□□□□ -1.55
SNED1Q8TER0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SNED1Q8TER0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNED1Q8TER0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 ZNF402P-201ENST00000404435 3100 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms