Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AC093278.2-201ENST00000564956 2485 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 OR56A4-201ENST00000330728 1209 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 RNU1-56P-201ENST00000391303 164 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 LDHAP5-201ENST00000394996 622 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 ARSFP1-201ENST00000398758 477 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 SNORA11.3-201ENST00000408471 128 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 RNA5SP118-201ENST00000410385 109 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 RPL24P2-201ENST00000421023 475 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 OR2B7P-201ENST00000429302 934 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 CBX3P6-201ENST00000430257 527 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 RPL37P21-201ENST00000435890 276 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 FUNDC2P2-202ENST00000443452 493 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 Y_RNA.639-201ENST00000458981 102 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 SNORD19B-201ENST00000459623 84 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 PSAT1P4-201ENST00000466500 526 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 RN7SL392P-201ENST00000473024 299 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 OR9A1P-202ENST00000484361 945 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 PPP1R11P1-201ENST00000486095 376 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 RN7SL561P-201ENST00000488553 281 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC093809.1-201ENST00000509155 340 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 NPM1P21-201ENST00000513394 762 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC010493.1-201ENST00000513479 292 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 RNA5SP518-201ENST00000515957 119 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 SNORA81.2-201ENST00000516868 170 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC092375.1-201ENST00000550410 637 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AL135978.1-201ENST00000553618 1266 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 DYNLL1P1-201ENST00000595442 269 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC009027.1-201ENST00000604510 479 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AL137000.1-201ENST00000610528 1244 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC087588.2-201ENST00000617667 426 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 SNORA11.6-201ENST00000619030 128 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC068831.8-201ENST00000620171 435 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC117409.1-201ENST00000470499 1310 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 AC011455.2-201ENST00000599320 3336 ntBASIC6.98□□□□□ -1.29
FOXR1Q6PIV2 OR2A3P-202ENST00000641249 1776 ntBASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
FOXR1Q6PIV2 HMGB1P5-201ENST00000255320 642 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms