Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC099669.2-201ENST00000616549 437 ntBASIC4.59□□□□□ -1.67
C11orf88Q6PI97 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.59□□□□□ -1.67
C11orf88Q6PI97 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.59□□□□□ -1.67
C11orf88Q6PI97 AC097460.3-201ENST00000623099 442 ntBASIC4.59□□□□□ -1.67
C11orf88Q6PI97 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.59□□□□□ -1.67
C11orf88Q6PI97 AC073592.7-201ENST00000623659 507 ntBASIC4.59□□□□□ -1.67
C11orf88Q6PI97 AC067931.1-201ENST00000624190 671 ntBASIC4.59□□□□□ -1.67
C11orf88Q6PI97 AL390318.1-201ENST00000624564 687 ntBASIC4.59□□□□□ -1.67
C11orf88Q6PI97 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.59□□□□□ -1.67
C11orf88Q6PI97 AL672167.1-204ENST00000641875 3017 ntBASIC4.59□□□□□ -1.67
C11orf88Q6PI97 AC007390.2-201ENST00000606229 3803 ntBASIC4.59□□□□□ -1.68
C11orf88Q6PI97 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
C11orf88Q6PI97 AC126323.6-202ENST00000568092 3511 ntBASIC4.59□□□□□ -1.68
C11orf88Q6PI97 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 MFSD8-220ENST00000641243 1422 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 RNA5SP394-201ENST00000364216 119 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AL078604.1-201ENST00000404609 466 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AL391361.1-201ENST00000405580 489 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AP000534.2-201ENST00000412729 568 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AL357752.1-201ENST00000412817 349 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 RPSAP35-201ENST00000413753 818 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 NANOGP4-201ENST00000427230 913 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 RPS6P12-201ENST00000432491 726 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 HMGB3P24-201ENST00000433260 622 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC005297.1-201ENST00000444765 862 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 RPL6P5-201ENST00000445678 828 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 HMGB1P48-201ENST00000446155 598 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 DNAJC19P8-201ENST00000452887 259 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AL645939.1-201ENST00000453429 797 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 RANP1-206ENST00000455094 651 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 RPS26P39-201ENST00000469206 341 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC007688.1-201ENST00000475592 759 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC087672.1-201ENST00000479876 766 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC009120.1-201ENST00000493458 473 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC108693.1-201ENST00000496068 432 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 HMGB1P21-201ENST00000502313 581 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 NIFKP7-201ENST00000503365 834 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC090071.1-201ENST00000507713 644 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC005351.1-201ENST00000511152 786 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 RNA5SP497-201ENST00000516081 97 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC021678.3-201ENST00000517893 476 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC027369.5-201ENST00000533838 755 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AC026979.4-201ENST00000606555 645 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AP000648.2-201ENST00000624182 404 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 SAGE2P-201ENST00000420011 2126 ntBASIC4.58□□□□□ -1.68
C11orf88Q6PI97 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C11orf88Q6PI97 AL022393.1-201ENST00000625142 1677 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 TLK1P1-201ENST00000456760 2440 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC016716.1-201ENST00000265882 708 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 RNU6-1339P-201ENST00000363574 91 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 RNU6-481P-201ENST00000384194 107 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AL158050.1-201ENST00000416077 457 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 NPM1P34-201ENST00000428821 893 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 ELOCP6-201ENST00000429066 328 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 SUMO2P3-201ENST00000438311 288 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC074367.1-201ENST00000438685 1125 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC004865.1-201ENST00000442276 1003 ntBASIC4.57□□□□□ -1.68
C11orf88Q6PI97 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.57□□□□□ -1.68
C11orf88Q6PI97 RPL23AP15-201ENST00000450202 459 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms