Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RN7SKP273-201ENST00000411392 314 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 NPM1P40-201ENST00000412758 733 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 SEPT7P8-201ENST00000413308 775 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 RPP40P1-201ENST00000426762 456 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AL606490.7-201ENST00000433136 191 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC073052.1-201ENST00000440417 714 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC245517.2-201ENST00000442890 346 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AL354714.3-201ENST00000447284 493 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AURKAPS1-201ENST00000451805 1212 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 RPL23AP23-201ENST00000452590 471 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC092155.2-201ENST00000454675 477 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 RN7SL799P-201ENST00000475891 298 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC090114.3-201ENST00000479267 829 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC008410.1-201ENST00000483777 339 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 HMGN2P25-201ENST00000486956 268 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 RN7SL30P-201ENST00000488416 306 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 HMGB1P3-201ENST00000502802 616 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC010486.2-201ENST00000505572 483 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 GOLGA5P1-201ENST00000507317 980 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 HIGD1AP14-201ENST00000507617 282 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 RNA5SP43-201ENST00000516559 110 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 SCARNA21.2-201ENST00000516600 166 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC104229.1-201ENST00000561364 255 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC009094.1-201ENST00000564443 426 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AP005136.1-201ENST00000579765 429 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC011447.4-201ENST00000587562 111 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 CCDC58P3-201ENST00000590792 430 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 MTCO3P22-201ENST00000603219 784 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 QTRT1P1-201ENST00000604344 1078 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC037198.3-201ENST00000616754 526 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC098679.4-201ENST00000624241 654 ntBASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.95□□□□□ -1.62
ZNF549Q6P9A3 AC000374.1-201ENST00000434698 1745 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 NXF4-202ENST00000416098 1465 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC025574.1-201ENST00000554784 1653 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 RPL23P2-201ENST00000320371 421 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 SNORD116-1-201ENST00000384335 95 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 MIR223-201ENST00000385204 110 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 RNU6-796P-201ENST00000391086 107 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AL445183.3-201ENST00000414168 502 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 DDX39BP1-205ENST00000422507 192 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 USP9YP11-201ENST00000427537 717 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 BX119904.1-201ENST00000432026 348 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC104849.1-201ENST00000462623 405 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC022336.1-201ENST00000475510 337 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 RPS18P6-201ENST00000476880 458 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC008953.1-201ENST00000497334 318 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms