Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 FAM27B-201ENST00000610601 213 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 AC074276.2-201ENST00000619891 348 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 AC067931.1-201ENST00000624190 671 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 AL355480.1-201ENST00000629041 99 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFX4Q33E94 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFX4Q33E94 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFX4Q33E94 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFX4Q33E94 AC007342.9-201ENST00000623877 1385 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
RFX4Q33E94 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.24□□□□□ -1.73
RFX4Q33E94 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.23□□□□□ -1.73
RFX4Q33E94 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.23□□□□□ -1.73
RFX4Q33E94 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 OR13C3-201ENST00000374781 1108 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 MIR765-201ENST00000390226 114 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 MIR708-201ENST00000390708 88 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 CHMP1B2P-201ENST00000399581 597 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 TRIM60P17-201ENST00000415181 719 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.23□□□□□ -1.73
RFX4Q33E94 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.23□□□□□ -1.73
RFX4Q33E94 GAPDHP49-201ENST00000421421 961 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.23□□□□□ -1.73
RFX4Q33E94 AC112498.1-201ENST00000444401 332 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 AL935212.3-201ENST00000450729 284 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 AURKAPS2-201ENST00000454983 333 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.23□□□□□ -1.73
RFX4Q33E94 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.23□□□□□ -1.73
RFX4Q33E94 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.23□□□□□ -1.73
RFX4Q33E94 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.23□□□□□ -1.73
RFX4Q33E94 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.23□□□□□ -1.73
RFX4Q33E94 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.23□□□□□ -1.73
RFX4Q33E94 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.23□□□□□ -1.73
RFX4Q33E94 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.23□□□□□ -1.73
RFX4Q33E94 ADAD1P2-201ENST00000588476 646 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.23□□□□□ -1.73
RFX4Q33E94 AL139395.1-201ENST00000603662 160 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.23□□□□□ -1.73
RFX4Q33E94 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RFX4Q33E94 C4BPAP1-201ENST00000415474 1893 ntBASIC4.23□□□□□ -1.73
RFX4Q33E94 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.23□□□□□ -1.73
RFX4Q33E94 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
RFX4Q33E94 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX4Q33E94 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RFX4Q33E94 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RFX4Q33E94 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.22□□□□□ -1.73
RFX4Q33E94 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
RFX4Q33E94 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFX4Q33E94 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFX4Q33E94 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.22□□□□□ -1.73
RFX4Q33E94 RNU4-4P-201ENST00000364588 130 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFX4Q33E94 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RFX4Q33E94 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFX4Q33E94 AL035696.2-201ENST00000407941 709 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 OR51B3P-201ENST00000412287 913 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RFX4Q33E94 AC092570.3-201ENST00000420113 693 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.22□□□□□ -1.73
RFX4Q33E94 NANOGP6-201ENST00000429190 847 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RFX4Q33E94 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.22□□□□□ -1.73
RFX4Q33E94 H2AFZP5-201ENST00000446960 382 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RFX4Q33E94 AC243772.1-201ENST00000451620 410 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RFX4Q33E94 AC079168.2-201ENST00000453977 416 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 ISCUP1-201ENST00000454451 448 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 RN7SL629P-201ENST00000489622 285 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.22□□□□□ -1.73
RFX4Q33E94 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.22□□□□□ -1.73
RFX4Q33E94 UBTFL9-201ENST00000534504 1148 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 GCSHP4-201ENST00000538792 439 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.22□□□□□ -1.73
RFX4Q33E94 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.22□□□□□ -1.73
RFX4Q33E94 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.22□□□□□ -1.73
RFX4Q33E94 AC087763.1-201ENST00000603391 286 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 AC117490.2-201ENST00000610042 594 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 AL512624.1-201ENST00000613638 469 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 MIR4727-201ENST00000622232 55 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 AC002044.3-201ENST00000623314 541 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 AP002799.1-201ENST00000623552 423 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 AC112694.2-201ENST00000623697 768 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.22□□□□□ -1.73
RFX4Q33E94 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RFX4Q33E94 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
RFX4Q33E94 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
RFX4Q33E94 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms