Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC96Q2M329 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC96Q2M329 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 AP001273.1-201ENST00000624493 3152 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC96Q2M329 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC96Q2M329 RN7SKP115-201ENST00000363177 317 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 CYB5AP4-201ENST00000396692 399 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 RN7SKP16-201ENST00000410180 299 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 RNA5SP113-201ENST00000410486 84 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 AC007559.1-201ENST00000428736 355 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 USP9YP9-201ENST00000429406 715 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 AC073052.1-201ENST00000440417 714 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 AC093166.2-201ENST00000455969 1017 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 AC007686.1-201ENST00000488511 463 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 HMGB1P3-201ENST00000502802 616 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 RNU6-889P-201ENST00000517189 103 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC96Q2M329 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 MIR4270-201ENST00000581799 70 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 MIR4472-2-201ENST00000582069 67 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 AC011472.4-201ENST00000615848 491 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC96Q2M329 AL356094.1-201ENST00000624663 1212 ntBASIC5.71□□□□□ -1.5
CCDC96Q2M329 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC96Q2M329 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC96Q2M329 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC96Q2M329 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC96Q2M329 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 SNORA27.3-201ENST00000364937 134 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 RNU6-146P-201ENST00000384602 108 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 AC019050.1-201ENST00000418508 492 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 DPY19L1P2-201ENST00000426647 915 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 IFNWP4-201ENST00000453148 294 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 AURKAPS2-201ENST00000454983 333 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 RPS17P2-201ENST00000461663 408 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 AC113430.1-201ENST00000506872 718 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 RNA5SP392-201ENST00000516905 112 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 AP001880.2-201ENST00000538233 448 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 AL049870.4-201ENST00000555741 486 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 AC018552.3-201ENST00000567416 561 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 AC091042.1-201ENST00000579213 173 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 AP005119.2-201ENST00000579735 1105 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 AL512782.1-201ENST00000603093 364 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 AC092574.1-201ENST00000609771 420 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 MIR6748-201ENST00000610433 71 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 uc_338.9-201ENST00000617424 182 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 AL139254.3-201ENST00000641097 674 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC96Q2M329 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC96Q2M329 SMG1P4-204ENST00000523028 4131 ntBASIC5.7□□□□□ -1.5
CCDC96Q2M329 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AL592437.2-201ENST00000421655 2434 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AC068446.1-201ENST00000556425 1549 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC96Q2M329 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC96Q2M329 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC96Q2M329 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AC013429.2-201ENST00000418798 781 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 OR2B7P-201ENST00000429302 934 ntBASIC5.69□□□□□ -1.5
CCDC96Q2M329 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC96Q2M329 AC000111.2-201ENST00000448200 210 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms