Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AP004607.2-201ENST00000533949 322 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AL049830.4-201ENST00000555149 351 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN1BQ07699 NDUFA5P11-201ENST00000567995 343 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 AC090312.2-201ENST00000582687 378 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN1BQ07699 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC023509.5-201ENST00000617434 807 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN1BQ07699 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
SCN1BQ07699 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN1BQ07699 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN1BQ07699 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN1BQ07699 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SCN1BQ07699 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN1BQ07699 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN1BQ07699 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN1BQ07699 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN1BQ07699 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN1BQ07699 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN1BQ07699 RNA5SP319-201ENST00000362768 119 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.53□□□□□ -1.68
SCN1BQ07699 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN1BQ07699 RNA5SP284-201ENST00000384547 118 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN1BQ07699 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN1BQ07699 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.53□□□□□ -1.68
SCN1BQ07699 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.53□□□□□ -1.68
SCN1BQ07699 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.53□□□□□ -1.68
SCN1BQ07699 CYCSP10-201ENST00000417973 294 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AC093155.2-201ENST00000420734 937 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN1BQ07699 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN1BQ07699 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.53□□□□□ -1.68
SCN1BQ07699 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.53□□□□□ -1.68
SCN1BQ07699 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN1BQ07699 RPS26P30-201ENST00000443431 335 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN1BQ07699 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.53□□□□□ -1.68
SCN1BQ07699 MRPL35P4-201ENST00000453682 566 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AC073522.1-201ENST00000483312 377 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.53□□□□□ -1.68
SCN1BQ07699 AC098799.3-201ENST00000506095 438 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AC104108.1-201ENST00000509930 412 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AC110792.2-201ENST00000510278 224 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN1BQ07699 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AC022790.1-201ENST00000522872 204 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN1BQ07699 OR1F2P-201ENST00000570470 933 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AC008521.2-201ENST00000591021 259 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.53□□□□□ -1.68
SCN1BQ07699 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN1BQ07699 EIF1P6-201ENST00000600054 334 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AC009597.2-201ENST00000604659 592 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN1BQ07699 AC084824.5-201ENST00000612009 413 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN1BQ07699 MIR6778-201ENST00000617912 73 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AL669942.2-201ENST00000620352 697 ntBASIC4.53□□□□□ -1.68
SCN1BQ07699 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN1BQ07699 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN1BQ07699 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
SCN1BQ07699 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SCN1BQ07699 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN1BQ07699 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.52□□□□□ -1.69
SCN1BQ07699 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 TMSB4XP4-201ENST00000323496 618 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SCN1BQ07699 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SCN1BQ07699 RNU1-94P-201ENST00000362627 173 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 RNU6-1339P-201ENST00000363574 91 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SCN1BQ07699 RPL23AP59-201ENST00000399415 461 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 AL133388.1-201ENST00000404509 287 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 AL390316.1-201ENST00000406279 553 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 U3.32-201ENST00000408116 212 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 PRELID3BP11-201ENST00000414230 479 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN1BQ07699 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.52□□□□□ -1.69
SCN1BQ07699 AC009238.2-201ENST00000431026 355 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 YWHAEP5-201ENST00000431545 765 ntBASIC4.52□□□□□ -1.69
SCN1BQ07699 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms