Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.89□□□□□ -1.63
TNNC1P63316 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TNNC1P63316 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.89□□□□□ -1.63
TNNC1P63316 AC122134.1-201ENST00000565664 1104 ntBASIC4.89□□□□□ -1.63
TNNC1P63316 MTND6P33-201ENST00000571794 183 ntBASIC4.89□□□□□ -1.63
TNNC1P63316 AL121834.1-201ENST00000572284 509 ntBASIC4.89□□□□□ -1.63
TNNC1P63316 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.89□□□□□ -1.63
TNNC1P63316 AC020915.5-201ENST00000596836 964 ntBASIC4.89□□□□□ -1.63
TNNC1P63316 AC019193.2-201ENST00000610012 634 ntBASIC4.89□□□□□ -1.63
TNNC1P63316 AL136295.6-201ENST00000610486 658 ntBASIC4.89□□□□□ -1.63
TNNC1P63316 AL353726.1-201ENST00000614041 1000 ntBASIC4.89□□□□□ -1.63
TNNC1P63316 MIR7154-201ENST00000620673 73 ntBASIC4.89□□□□□ -1.63
TNNC1P63316 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.89□□□□□ -1.63
TNNC1P63316 LINC01808-202ENST00000641680 1116 ntBASIC4.89□□□□□ -1.63
TNNC1P63316 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNNC1P63316 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNNC1P63316 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNNC1P63316 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TNNC1P63316 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNNC1P63316 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.89□□□□□ -1.63
TNNC1P63316 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TNNC1P63316 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNNC1P63316 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
TNNC1P63316 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TNNC1P63316 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNNC1P63316 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TNNC1P63316 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.88□□□□□ -1.63
TNNC1P63316 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TNNC1P63316 MFSD8-242ENST00000641690 4199 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.88□□□□□ -1.63
TNNC1P63316 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNNC1P63316 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.88□□□□□ -1.63
TNNC1P63316 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TNNC1P63316 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TNNC1P63316 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNNC1P63316 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.88□□□□□ -1.63
TNNC1P63316 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNNC1P63316 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNNC1P63316 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TNNC1P63316 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.88□□□□□ -1.63
TNNC1P63316 RNU6-233P-201ENST00000410845 141 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.88□□□□□ -1.63
TNNC1P63316 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.88□□□□□ -1.63
TNNC1P63316 CENPIP1-201ENST00000425713 902 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TNNC1P63316 AL591623.2-201ENST00000449978 222 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.88□□□□□ -1.63
TNNC1P63316 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.88□□□□□ -1.63
TNNC1P63316 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.88□□□□□ -1.63
TNNC1P63316 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.88□□□□□ -1.63
TNNC1P63316 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.88□□□□□ -1.63
TNNC1P63316 AC018442.3-201ENST00000523025 183 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.88□□□□□ -1.63
TNNC1P63316 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.88□□□□□ -1.63
TNNC1P63316 ADAD1P2-201ENST00000588476 646 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 AC124856.1-201ENST00000600819 896 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 AC119501.1-201ENST00000603646 475 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 AL669942.2-201ENST00000620352 697 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 AP005019.3-201ENST00000620418 560 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TNNC1P63316 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.88□□□□□ -1.63
TNNC1P63316 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TNNC1P63316 AL132640.2-201ENST00000559968 1698 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 Z98755.1-201ENST00000407015 1384 ntBASIC4.88□□□□□ -1.63
TNNC1P63316 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNNC1P63316 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNNC1P63316 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TNNC1P63316 AC120338.1-201ENST00000625074 1541 ntBASIC4.87□□□□□ -1.63
TNNC1P63316 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNNC1P63316 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.87□□□□□ -1.63
TNNC1P63316 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNNC1P63316 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNNC1P63316 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNNC1P63316 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNNC1P63316 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNNC1P63316 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.87□□□□□ -1.63
TNNC1P63316 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
TNNC1P63316 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.87□□□□□ -1.63
TNNC1P63316 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNNC1P63316 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TNNC1P63316 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNNC1P63316 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNNC1P63316 OR2X1P-201ENST00000421144 687 ntBASIC4.87□□□□□ -1.63
TNNC1P63316 DYNLL1P7-201ENST00000429273 258 ntBASIC4.87□□□□□ -1.63
TNNC1P63316 TXNP2-201ENST00000443918 295 ntBASIC4.87□□□□□ -1.63
TNNC1P63316 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.87□□□□□ -1.63
TNNC1P63316 MTND2P28-201ENST00000457540 1044 ntBASIC4.87□□□□□ -1.63
TNNC1P63316 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.87□□□□□ -1.63
TNNC1P63316 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.87□□□□□ -1.63
TNNC1P63316 AC008694.2-201ENST00000517591 306 ntBASIC4.87□□□□□ -1.63
TNNC1P63316 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.87□□□□□ -1.63
TNNC1P63316 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNNC1P63316 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.87□□□□□ -1.63
TNNC1P63316 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.87□□□□□ -1.63
TNNC1P63316 AC096586.2-201ENST00000610260 441 ntBASIC4.87□□□□□ -1.63
TNNC1P63316 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.87□□□□□ -1.63
TNNC1P63316 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.87□□□□□ -1.63
TNNC1P63316 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.87□□□□□ -1.63
TNNC1P63316 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNNC1P63316 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms