Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.58□□□□□ -1.52
NEK3P51956 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.58□□□□□ -1.52
NEK3P51956 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NEK3P51956 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.58□□□□□ -1.52
NEK3P51956 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.58□□□□□ -1.52
NEK3P51956 TCP11X3P-202ENST00000514289 1254 ntBASIC5.58□□□□□ -1.52
NEK3P51956 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.58□□□□□ -1.52
NEK3P51956 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.58□□□□□ -1.52
NEK3P51956 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.58□□□□□ -1.52
NEK3P51956 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.58□□□□□ -1.52
NEK3P51956 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.58□□□□□ -1.52
NEK3P51956 OR8K4P-201ENST00000534608 872 ntBASIC5.58□□□□□ -1.52
NEK3P51956 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.58□□□□□ -1.52
NEK3P51956 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.58□□□□□ -1.52
NEK3P51956 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.58□□□□□ -1.52
NEK3P51956 RN7SL290P-201ENST00000578661 300 ntBASIC5.58□□□□□ -1.52
NEK3P51956 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.58□□□□□ -1.52
NEK3P51956 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NEK3P51956 H3F3BP2-201ENST00000583907 357 ntBASIC5.58□□□□□ -1.52
NEK3P51956 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.58□□□□□ -1.52
NEK3P51956 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
NEK3P51956 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.58□□□□□ -1.52
NEK3P51956 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.58□□□□□ -1.52
NEK3P51956 AL365400.2-201ENST00000605604 902 ntBASIC5.58□□□□□ -1.52
NEK3P51956 AL138478.1-201ENST00000612252 832 ntBASIC5.58□□□□□ -1.52
NEK3P51956 MIR6837-201ENST00000620884 64 ntBASIC5.58□□□□□ -1.52
NEK3P51956 AC004232.3-201ENST00000622977 525 ntBASIC5.58□□□□□ -1.52
NEK3P51956 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.58□□□□□ -1.52
NEK3P51956 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.58□□□□□ -1.52
NEK3P51956 CASC19-264ENST00000641912 1184 ntBASIC5.58□□□□□ -1.52
NEK3P51956 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEK3P51956 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEK3P51956 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEK3P51956 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NEK3P51956 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NEK3P51956 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
NEK3P51956 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NEK3P51956 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NEK3P51956 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NEK3P51956 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.57□□□□□ -1.52
NEK3P51956 AC235565.1-201ENST00000456962 1325 ntBASIC5.57□□□□□ -1.52
NEK3P51956 GVINP1-202ENST00000531871 7271 ntBASIC5.57□□□□□ -1.52
NEK3P51956 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NEK3P51956 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NEK3P51956 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NEK3P51956 RNA5SP241-201ENST00000391326 114 ntBASIC5.57□□□□□ -1.52
NEK3P51956 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NEK3P51956 PPIAP9-201ENST00000403866 498 ntBASIC5.57□□□□□ -1.52
NEK3P51956 AP000534.2-201ENST00000412729 568 ntBASIC5.57□□□□□ -1.52
NEK3P51956 Z75741.2-201ENST00000417272 1167 ntBASIC5.57□□□□□ -1.52
NEK3P51956 AL121878.1-201ENST00000418638 859 ntBASIC5.57□□□□□ -1.52
NEK3P51956 BX510359.3-201ENST00000422168 306 ntBASIC5.57□□□□□ -1.52
NEK3P51956 AL355433.1-201ENST00000422804 300 ntBASIC5.57□□□□□ -1.52
NEK3P51956 RPF2P1-201ENST00000424137 906 ntBASIC5.57□□□□□ -1.52
NEK3P51956 RPL7P56-201ENST00000429441 717 ntBASIC5.57□□□□□ -1.52
NEK3P51956 MTND2P5-201ENST00000432656 1006 ntBASIC5.57□□□□□ -1.52
NEK3P51956 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.57□□□□□ -1.52
NEK3P51956 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.57□□□□□ -1.52
NEK3P51956 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.57□□□□□ -1.52
NEK3P51956 NPM1P13-201ENST00000452663 865 ntBASIC5.57□□□□□ -1.52
NEK3P51956 AC011225.1-201ENST00000457751 369 ntBASIC5.57□□□□□ -1.52
NEK3P51956 AC096992.1-201ENST00000459808 709 ntBASIC5.57□□□□□ -1.52
NEK3P51956 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NEK3P51956 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.57□□□□□ -1.52
NEK3P51956 AC113420.1-201ENST00000507903 571 ntBASIC5.57□□□□□ -1.52
NEK3P51956 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.57□□□□□ -1.52
NEK3P51956 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.57□□□□□ -1.52
NEK3P51956 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.57□□□□□ -1.52
NEK3P51956 AC034205.1-201ENST00000520621 638 ntBASIC5.57□□□□□ -1.52
NEK3P51956 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.57□□□□□ -1.52
NEK3P51956 OR8G5-201ENST00000524943 1041 ntBASIC5.57□□□□□ -1.52
NEK3P51956 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.57□□□□□ -1.52
NEK3P51956 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.57□□□□□ -1.52
NEK3P51956 FKBP1AP1-201ENST00000594588 318 ntBASIC5.57□□□□□ -1.52
NEK3P51956 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.57□□□□□ -1.52
NEK3P51956 AC011453.2-201ENST00000603737 729 ntBASIC5.57□□□□□ -1.52
NEK3P51956 AC091488.1-201ENST00000604239 660 ntBASIC5.57□□□□□ -1.52
NEK3P51956 RNU4-5P-201ENST00000607255 135 ntBASIC5.57□□□□□ -1.52
NEK3P51956 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.57□□□□□ -1.52
NEK3P51956 AC243756.2-201ENST00000618406 463 ntBASIC5.57□□□□□ -1.52
NEK3P51956 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.57□□□□□ -1.52
NEK3P51956 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NEK3P51956 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.57□□□□□ -1.52
NEK3P51956 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.57□□□□□ -1.52
NEK3P51956 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NEK3P51956 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NEK3P51956 AC114546.3-201ENST00000623582 1734 ntBASIC5.57□□□□□ -1.52
NEK3P51956 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NEK3P51956 THAP12P5-201ENST00000405864 2275 ntBASIC5.57□□□□□ -1.52
NEK3P51956 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NEK3P51956 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NEK3P51956 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.56□□□□□ -1.52
NEK3P51956 AC007529.1-201ENST00000418574 2178 ntBASIC5.56□□□□□ -1.52
NEK3P51956 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NEK3P51956 AC083843.2-201ENST00000568248 6253 ntBASIC5.56□□□□□ -1.52
NEK3P51956 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.56□□□□□ -1.52
NEK3P51956 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NEK3P51956 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.56□□□□□ -1.52
NEK3P51956 RNU6-619P-201ENST00000365146 108 ntBASIC5.56□□□□□ -1.52
NEK3P51956 RNU6-1151P-201ENST00000384684 107 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms