Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.29□□□□□ -1.4
MRE11P49959 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.29□□□□□ -1.4
MRE11P49959 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.29□□□□□ -1.4
MRE11P49959 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.29□□□□□ -1.4
MRE11P49959 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.29□□□□□ -1.4
MRE11P49959 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
MRE11P49959 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.29□□□□□ -1.4
MRE11P49959 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC6.29□□□□□ -1.4
MRE11P49959 AL591473.1-201ENST00000464297 313 ntBASIC6.29□□□□□ -1.4
MRE11P49959 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.29□□□□□ -1.4
MRE11P49959 RPL7AP6-201ENST00000477943 801 ntBASIC6.29□□□□□ -1.4
MRE11P49959 AC016687.1-201ENST00000482574 353 ntBASIC6.29□□□□□ -1.4
MRE11P49959 RPS3AP22-201ENST00000488297 769 ntBASIC6.29□□□□□ -1.4
MRE11P49959 NIFKP7-201ENST00000503365 834 ntBASIC6.29□□□□□ -1.4
MRE11P49959 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.29□□□□□ -1.4
MRE11P49959 SNORA3.4-201ENST00000515969 96 ntBASIC6.29□□□□□ -1.4
MRE11P49959 SCARNA20.4-201ENST00000516969 131 ntBASIC6.29□□□□□ -1.4
MRE11P49959 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.29□□□□□ -1.4
MRE11P49959 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.29□□□□□ -1.4
MRE11P49959 MTCO2P15-201ENST00000532655 656 ntBASIC6.29□□□□□ -1.4
MRE11P49959 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.29□□□□□ -1.4
MRE11P49959 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MRE11P49959 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.29□□□□□ -1.4
MRE11P49959 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.29□□□□□ -1.4
MRE11P49959 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC6.29□□□□□ -1.4
MRE11P49959 NBR2-204ENST00000587322 63 ntBASIC6.29□□□□□ -1.4
MRE11P49959 AL133507.1-201ENST00000605269 557 ntBASIC6.29□□□□□ -1.4
MRE11P49959 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MRE11P49959 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6.29□□□□□ -1.4
MRE11P49959 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
MRE11P49959 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
MRE11P49959 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.29□□□□□ -1.4
MRE11P49959 MTND4P4-201ENST00000439033 1366 ntBASIC6.29□□□□□ -1.4
MRE11P49959 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
MRE11P49959 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
MRE11P49959 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.28□□□□□ -1.4
MRE11P49959 ZNF876P-202ENST00000398732 1485 ntBASIC6.28□□□□□ -1.4
MRE11P49959 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.28□□□□□ -1.4
MRE11P49959 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
MRE11P49959 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
MRE11P49959 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.28□□□□□ -1.4
MRE11P49959 SELENOWP1-201ENST00000322792 252 ntBASIC6.28□□□□□ -1.4
MRE11P49959 SNORA21-201ENST00000362423 132 ntBASIC6.28□□□□□ -1.4
MRE11P49959 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
MRE11P49959 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.28□□□□□ -1.4
MRE11P49959 RN7SKP27-201ENST00000410684 333 ntBASIC6.28□□□□□ -1.4
MRE11P49959 RN7SKP213-201ENST00000410746 298 ntBASIC6.28□□□□□ -1.4
MRE11P49959 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.28□□□□□ -1.4
MRE11P49959 RAB9AP4-201ENST00000415230 609 ntBASIC6.28□□□□□ -1.4
MRE11P49959 QRSL1P2-201ENST00000418582 964 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.28□□□□□ -1.4
MRE11P49959 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.28□□□□□ -1.4
MRE11P49959 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
MRE11P49959 AL365396.1-201ENST00000430854 671 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.28□□□□□ -1.4
MRE11P49959 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.28□□□□□ -1.4
MRE11P49959 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.28□□□□□ -1.4
MRE11P49959 MUPP-201ENST00000438111 566 ntBASIC6.28□□□□□ -1.4
MRE11P49959 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.28□□□□□ -1.4
MRE11P49959 AL512605.1-202ENST00000441919 381 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.28□□□□□ -1.4
MRE11P49959 AL359955.2-201ENST00000445380 353 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AL627224.1-201ENST00000448334 444 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AC002553.3-201ENST00000453002 341 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.28□□□□□ -1.4
MRE11P49959 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC6.28□□□□□ -1.4
MRE11P49959 AC068587.1-201ENST00000483613 781 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AC109481.1-201ENST00000509173 282 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AC133963.2-201ENST00000513686 578 ntBASIC6.28□□□□□ -1.4
MRE11P49959 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.28□□□□□ -1.4
MRE11P49959 RFPL4AP3-201ENST00000515267 345 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AC138938.1-201ENST00000515431 782 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.28□□□□□ -1.4
MRE11P49959 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
MRE11P49959 SETP1-201ENST00000556014 845 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AC106734.1-201ENST00000568646 663 ntBASIC6.28□□□□□ -1.4
MRE11P49959 MIR4330-201ENST00000579077 105 ntBASIC6.28□□□□□ -1.4
MRE11P49959 MIR1254-2-201ENST00000579553 63 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.28□□□□□ -1.4
MRE11P49959 FKBP1AP1-201ENST00000594588 318 ntBASIC6.28□□□□□ -1.4
MRE11P49959 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MRE11P49959 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MRE11P49959 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.28□□□□□ -1.4
MRE11P49959 AC245100.7-201ENST00000609678 442 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.28□□□□□ -1.4
MRE11P49959 AL121612.2-201ENST00000612261 482 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AL021918.2-201ENST00000613415 194 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AC015660.5-201ENST00000623238 564 ntBASIC6.28□□□□□ -1.4
MRE11P49959 AL390318.1-201ENST00000624564 687 ntBASIC6.28□□□□□ -1.4
MRE11P49959 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
MRE11P49959 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
MRE11P49959 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MRE11P49959 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
MRE11P49959 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
MRE11P49959 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
MRE11P49959 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.27□□□□□ -1.4
MRE11P49959 AC019072.1-201ENST00000604535 1551 ntBASIC6.27□□□□□ -1.41
MRE11P49959 MTND5P11-201ENST00000511037 1812 ntBASIC6.27□□□□□ -1.41
MRE11P49959 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
MRE11P49959 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms