Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 HMGB1P32-201ENST00000425971 565 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.1□□□□□ -1.75
CX3CR1P49238 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 OR52J1P-201ENST00000450596 932 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 EIF2S2P5-201ENST00000457635 968 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 RNU6-1218P-201ENST00000458990 108 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 AC090142.1-201ENST00000465776 462 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 NIP7P2-201ENST00000485801 544 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 RN7SL214P-201ENST00000487317 265 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 CDH12P2-201ENST00000504393 298 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 AC034244.2-201ENST00000514668 858 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 NPM1P6-201ENST00000521088 871 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.1□□□□□ -1.75
CX3CR1P49238 AC008033.2-201ENST00000542626 177 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.1□□□□□ -1.75
CX3CR1P49238 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.1□□□□□ -1.75
CX3CR1P49238 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.1□□□□□ -1.75
CX3CR1P49238 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.1□□□□□ -1.75
CX3CR1P49238 AC015912.2-201ENST00000571053 181 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.1□□□□□ -1.75
CX3CR1P49238 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.1□□□□□ -1.75
CX3CR1P49238 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.1□□□□□ -1.75
CX3CR1P49238 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.1□□□□□ -1.75
CX3CR1P49238 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.1□□□□□ -1.75
CX3CR1P49238 PSMA6P4-201ENST00000603247 718 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 AC133552.5-201ENST00000604266 540 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CR1P49238 AL391597.1-201ENST00000618707 694 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CX3CR1P49238 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.1□□□□□ -1.75
CX3CR1P49238 AC109780.1-201ENST00000451768 1344 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CX3CR1P49238 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CR1P49238 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CR1P49238 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.1□□□□□ -1.75
CX3CR1P49238 AL355852.1-201ENST00000454081 1771 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 AL031119.1-201ENST00000404707 1879 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
CX3CR1P49238 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CX3CR1P49238 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CX3CR1P49238 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CX3CR1P49238 RNU1-108P-201ENST00000362556 161 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 RN7SKP115-201ENST00000363177 317 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CX3CR1P49238 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.09□□□□□ -1.75
CX3CR1P49238 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CR1P49238 MIR1178-201ENST00000408396 91 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CX3CR1P49238 RNU6-564P-201ENST00000410983 104 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 OR2X1P-201ENST00000421144 687 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 Z74021.1-201ENST00000423610 407 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 AC092013.1-201ENST00000438795 332 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 SUMO2P1-206ENST00000445436 284 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 OR1H1P-201ENST00000448731 937 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.09□□□□□ -1.75
CX3CR1P49238 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CX3CR1P49238 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CR1P49238 AC010627.1-201ENST00000503819 1294 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 PGBD4P4-201ENST00000509673 613 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 AC110775.1-201ENST00000513721 462 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CR1P49238 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.09□□□□□ -1.75
CX3CR1P49238 AC021006.3-201ENST00000530771 192 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CR1P49238 AC090515.3-201ENST00000560431 315 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.09□□□□□ -1.75
CX3CR1P49238 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.09□□□□□ -1.75
CX3CR1P49238 AC020915.5-201ENST00000596836 964 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 AC005520.3-201ENST00000602874 370 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.09□□□□□ -1.75
CX3CR1P49238 CASC19-222ENST00000641321 1173 ntBASIC4.09□□□□□ -1.75
CX3CR1P49238 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CX3CR1P49238 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CX3CR1P49238 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CX3CR1P49238 CR788268.1-201ENST00000603931 1809 ntBASIC4.09□□□□□ -1.76
CX3CR1P49238 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CX3CR1P49238 PHKBP1-201ENST00000450951 1951 ntBASIC4.09□□□□□ -1.76
CX3CR1P49238 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.09□□□□□ -1.76
CX3CR1P49238 OR51H2P-202ENST00000641424 3046 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CR1P49238 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CR1P49238 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CR1P49238 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CR1P49238 OR56B2P-201ENST00000317102 954 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CX3CR1P49238 MIR320B1-201ENST00000390209 79 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 MIR921-201ENST00000401133 56 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.08□□□□□ -1.76
CX3CR1P49238 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CR1P49238 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CR1P49238 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CR1P49238 COX6B1P1-201ENST00000415962 213 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 CYP1D1P-201ENST00000416662 1433 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 BX510359.3-201ENST00000422168 306 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 AC007559.1-201ENST00000428736 355 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CR1P49238 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.08□□□□□ -1.76
CX3CR1P49238 AL353898.1-201ENST00000444055 238 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 H2AFZP5-201ENST00000446960 382 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms