Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RPL36AP41-201ENST00000493820 306 ntBASIC4.98□□□□□ -1.61
LHX1P48742 SUMO1P1-201ENST00000497904 306 ntBASIC4.98□□□□□ -1.61
LHX1P48742 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.98□□□□□ -1.61
LHX1P48742 RNU6-513P-201ENST00000516104 104 ntBASIC4.98□□□□□ -1.61
LHX1P48742 RN7SKP92-201ENST00000517266 244 ntBASIC4.98□□□□□ -1.61
LHX1P48742 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
LHX1P48742 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.98□□□□□ -1.61
LHX1P48742 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX1P48742 MIR3908-201ENST00000579798 126 ntBASIC4.98□□□□□ -1.61
LHX1P48742 ADAD1P2-201ENST00000588476 646 ntBASIC4.98□□□□□ -1.61
LHX1P48742 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 MIR6748-201ENST00000610433 71 ntBASIC4.98□□□□□ -1.61
LHX1P48742 AL512506.1-201ENST00000613918 449 ntBASIC4.98□□□□□ -1.61
LHX1P48742 AL356274.1-201ENST00000617064 410 ntBASIC4.98□□□□□ -1.61
LHX1P48742 AC004232.3-201ENST00000622977 525 ntBASIC4.98□□□□□ -1.61
LHX1P48742 U3.53-201ENST00000628922 216 ntBASIC4.98□□□□□ -1.61
LHX1P48742 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.98□□□□□ -1.61
LHX1P48742 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LHX1P48742 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.98□□□□□ -1.61
LHX1P48742 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX1P48742 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX1P48742 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX1P48742 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LHX1P48742 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX1P48742 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LHX1P48742 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
LHX1P48742 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
LHX1P48742 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LHX1P48742 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LHX1P48742 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LHX1P48742 AL031119.1-201ENST00000404707 1879 ntBASIC4.97□□□□□ -1.61
LHX1P48742 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LHX1P48742 TCP1P3-201ENST00000414406 1498 ntBASIC4.97□□□□□ -1.61
LHX1P48742 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LHX1P48742 AL512283.1-201ENST00000606756 1384 ntBASIC4.97□□□□□ -1.61
LHX1P48742 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LHX1P48742 OR6K3-202ENST00000368146 996 ntBASIC4.97□□□□□ -1.61
LHX1P48742 RPL5P19-201ENST00000404228 893 ntBASIC4.97□□□□□ -1.61
LHX1P48742 NMNAT1P2-201ENST00000435192 860 ntBASIC4.97□□□□□ -1.61
LHX1P48742 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.97□□□□□ -1.61
LHX1P48742 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.97□□□□□ -1.61
LHX1P48742 RHEBP2-201ENST00000450289 600 ntBASIC4.97□□□□□ -1.61
LHX1P48742 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.97□□□□□ -1.61
LHX1P48742 AC104763.1-201ENST00000475274 360 ntBASIC4.97□□□□□ -1.61
LHX1P48742 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.97□□□□□ -1.61
LHX1P48742 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.97□□□□□ -1.61
LHX1P48742 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.97□□□□□ -1.61
LHX1P48742 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.97□□□□□ -1.61
LHX1P48742 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.97□□□□□ -1.61
LHX1P48742 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.97□□□□□ -1.61
LHX1P48742 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.97□□□□□ -1.61
LHX1P48742 KATNBL1P5-201ENST00000605015 517 ntBASIC4.97□□□□□ -1.61
LHX1P48742 AC034236.3-201ENST00000605999 461 ntBASIC4.97□□□□□ -1.61
LHX1P48742 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.97□□□□□ -1.61
LHX1P48742 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LHX1P48742 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.97□□□□□ -1.61
LHX1P48742 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LHX1P48742 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LHX1P48742 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.97□□□□□ -1.61
LHX1P48742 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
LHX1P48742 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LHX1P48742 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
LHX1P48742 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.97□□□□□ -1.61
LHX1P48742 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
LHX1P48742 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.96□□□□□ -1.61
LHX1P48742 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.96□□□□□ -1.61
LHX1P48742 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
LHX1P48742 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LHX1P48742 AC108467.2-201ENST00000617640 1597 ntBASIC4.96□□□□□ -1.62
LHX1P48742 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.96□□□□□ -1.62
LHX1P48742 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LHX1P48742 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LHX1P48742 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.96□□□□□ -1.62
LHX1P48742 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LHX1P48742 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LHX1P48742 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LHX1P48742 AL136131.1-201ENST00000406079 803 ntBASIC4.96□□□□□ -1.62
LHX1P48742 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.96□□□□□ -1.62
LHX1P48742 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.96□□□□□ -1.62
LHX1P48742 H2AFZP6-201ENST00000444403 394 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AC104651.2-201ENST00000447549 528 ntBASIC4.96□□□□□ -1.62
LHX1P48742 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.96□□□□□ -1.62
LHX1P48742 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.96□□□□□ -1.62
LHX1P48742 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.96□□□□□ -1.62
LHX1P48742 AC092691.2-201ENST00000461787 803 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AL049829.1-201ENST00000465411 156 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AC006463.2-201ENST00000473326 348 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AC020890.1-201ENST00000491837 504 ntBASIC4.96□□□□□ -1.62
LHX1P48742 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.96□□□□□ -1.62
LHX1P48742 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.96□□□□□ -1.62
LHX1P48742 AC098799.3-201ENST00000506095 438 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AC007016.1-201ENST00000512110 244 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AC103833.1-201ENST00000517442 172 ntBASIC4.96□□□□□ -1.62
LHX1P48742 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.96□□□□□ -1.62
LHX1P48742 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.96□□□□□ -1.62
LHX1P48742 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms