Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.48□□□□□ -1.69
CXCL12P48061 AL121878.1-201ENST00000418638 859 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL12P48061 ARAFP2-201ENST00000440565 559 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL12P48061 DEFB109A-201ENST00000482450 265 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 RPL35P6-201ENST00000490024 372 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 MORF4L2P1-201ENST00000503761 858 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.48□□□□□ -1.69
CXCL12P48061 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.48□□□□□ -1.69
CXCL12P48061 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.48□□□□□ -1.69
CXCL12P48061 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL12P48061 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL12P48061 MIR6075-201ENST00000620782 95 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL12P48061 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL12P48061 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CXCL12P48061 AC107068.1-201ENST00000563286 4218 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL12P48061 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL12P48061 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL12P48061 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL12P48061 LINC00622-201ENST00000562811 1570 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CXCL12P48061 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL12P48061 AC109446.4-201ENST00000623235 2755 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL12P48061 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL12P48061 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CXCL12P48061 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.47□□□□□ -1.69
CXCL12P48061 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CXCL12P48061 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL12P48061 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL12P48061 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CXCL12P48061 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL12P48061 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL12P48061 AL161909.1-201ENST00000397390 712 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 PTMAP2-201ENST00000397627 327 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 AC007738.1-201ENST00000413892 348 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 AL356095.1-201ENST00000417217 199 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.47□□□□□ -1.69
CXCL12P48061 AL358232.1-201ENST00000448030 501 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL12P48061 RPS27AP17-201ENST00000463344 455 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CXCL12P48061 AC008958.1-201ENST00000511047 682 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CXCL12P48061 RNA5SP143-201ENST00000516936 115 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.47□□□□□ -1.69
CXCL12P48061 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.47□□□□□ -1.69
CXCL12P48061 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.47□□□□□ -1.69
CXCL12P48061 AC010547.7-201ENST00000570323 333 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 AC006272.2-201ENST00000594725 163 ntBASIC4.47□□□□□ -1.69
CXCL12P48061 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL12P48061 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL12P48061 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL12P48061 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL12P48061 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CXCL12P48061 VPS35P1-201ENST00000563400 1518 ntBASIC4.46□□□□□ -1.69
CXCL12P48061 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL12P48061 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL12P48061 UBBP2-201ENST00000376781 231 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 RNA5SP44-201ENST00000410446 133 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 RN7SKP159-201ENST00000410657 292 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 SMC4P1-201ENST00000414479 527 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL12P48061 AL354766.1-201ENST00000423396 542 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL12P48061 RPL21P89-201ENST00000444021 467 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 AC091959.2-201ENST00000477363 321 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 MYL12BP2-201ENST00000503948 512 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.46□□□□□ -1.7
CXCL12P48061 RNA5SP497-201ENST00000516081 97 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL12P48061 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.46□□□□□ -1.7
CXCL12P48061 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.46□□□□□ -1.7
CXCL12P48061 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.46□□□□□ -1.7
CXCL12P48061 AC079587.1-201ENST00000603846 277 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.46□□□□□ -1.7
CXCL12P48061 MIR6867-201ENST00000610636 67 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.46□□□□□ -1.7
CXCL12P48061 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.46□□□□□ -1.7
CXCL12P48061 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL12P48061 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.46□□□□□ -1.7
CXCL12P48061 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.46□□□□□ -1.7
CXCL12P48061 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.46□□□□□ -1.7
CXCL12P48061 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CXCL12P48061 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CXCL12P48061 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CXCL12P48061 TRGV7-201ENST00000427089 353 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 HMGB3P5-201ENST00000428894 612 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 NFYAP1-201ENST00000431953 972 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 RPL23AP52-201ENST00000439311 478 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.45□□□□□ -1.7
CXCL12P48061 AL162151.2-201ENST00000448875 158 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 RPL5P32-201ENST00000454085 879 ntBASIC4.45□□□□□ -1.7
CXCL12P48061 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms