Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.86□□□□□ -1.63
HNF4AP41235 AC090114.3-201ENST00000479267 829 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.86□□□□□ -1.63
HNF4AP41235 AC004815.1-201ENST00000484185 331 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.86□□□□□ -1.63
HNF4AP41235 AC010350.1-201ENST00000504908 231 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 AC006499.3-201ENST00000506077 748 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.86□□□□□ -1.63
HNF4AP41235 RN7SKP66-201ENST00000516681 231 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.86□□□□□ -1.63
HNF4AP41235 MTND1P36-201ENST00000522384 936 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.86□□□□□ -1.63
HNF4AP41235 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.86□□□□□ -1.63
HNF4AP41235 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.86□□□□□ -1.63
HNF4AP41235 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.86□□□□□ -1.63
HNF4AP41235 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.86□□□□□ -1.63
HNF4AP41235 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 AC011447.4-201ENST00000587562 111 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.86□□□□□ -1.63
HNF4AP41235 AC093765.1-201ENST00000603758 881 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.86□□□□□ -1.63
HNF4AP41235 AL121612.2-201ENST00000612261 482 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 AC025016.1-201ENST00000616746 682 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 AC022106.2-201ENST00000620114 757 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 AP002371.2-201ENST00000624450 503 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 AC080188.3-201ENST00000624842 748 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 AL138960.2-201ENST00000625145 535 ntBASIC4.86□□□□□ -1.63
HNF4AP41235 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HNF4AP41235 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.86□□□□□ -1.63
HNF4AP41235 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.86□□□□□ -1.63
HNF4AP41235 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HNF4AP41235 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HNF4AP41235 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.85□□□□□ -1.63
HNF4AP41235 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HNF4AP41235 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HNF4AP41235 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.85□□□□□ -1.63
HNF4AP41235 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HNF4AP41235 U8.4-201ENST00000363626 134 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HNF4AP41235 RNU1-106P-201ENST00000384382 164 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HNF4AP41235 RN7SKP278-201ENST00000410504 342 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 RNU2-72P-201ENST00000411175 163 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 DPPA2P3-201ENST00000411853 655 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.85□□□□□ -1.63
HNF4AP41235 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.85□□□□□ -1.63
HNF4AP41235 FO393419.3-201ENST00000428741 282 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 AP000949.1-201ENST00000438328 629 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.85□□□□□ -1.63
HNF4AP41235 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.85□□□□□ -1.63
HNF4AP41235 AL450023.3-201ENST00000440592 271 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.85□□□□□ -1.63
HNF4AP41235 MTND2P39-201ENST00000457230 764 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 AL591473.1-201ENST00000464297 313 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 HMGN2P25-201ENST00000486956 268 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 OR5M14P-201ENST00000506803 618 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.85□□□□□ -1.63
HNF4AP41235 AC022832.1-201ENST00000530718 645 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.85□□□□□ -1.63
HNF4AP41235 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.85□□□□□ -1.63
HNF4AP41235 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HNF4AP41235 NMNAT1P1-201ENST00000554095 876 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.85□□□□□ -1.63
HNF4AP41235 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.85□□□□□ -1.63
HNF4AP41235 ABI1P1-201ENST00000603375 1120 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 TAS2R6P-201ENST00000605022 826 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.85□□□□□ -1.63
HNF4AP41235 AL355802.4-201ENST00000607635 548 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HNF4AP41235 AC000123.2-201ENST00000623124 461 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 AC015871.5-202ENST00000623252 701 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.85□□□□□ -1.63
HNF4AP41235 AC109780.1-201ENST00000451768 1344 ntBASIC4.85□□□□□ -1.63
HNF4AP41235 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.85□□□□□ -1.63
HNF4AP41235 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HNF4AP41235 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HNF4AP41235 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.85□□□□□ -1.63
HNF4AP41235 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HNF4AP41235 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
HNF4AP41235 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.84□□□□□ -1.63
HNF4AP41235 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HNF4AP41235 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HNF4AP41235 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
HNF4AP41235 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
HNF4AP41235 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
HNF4AP41235 ZNF90P1-201ENST00000480493 1951 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HNF4AP41235 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.84□□□□□ -1.63
HNF4AP41235 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms