Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL161909.1-201ENST00000397390 712 ntBASIC5.66□□□□□ -1.5
RFC4P35249 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC4P35249 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.66□□□□□ -1.5
RFC4P35249 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC4P35249 AL117339.2-201ENST00000430475 180 ntBASIC5.66□□□□□ -1.5
RFC4P35249 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.66□□□□□ -1.5
RFC4P35249 MYL12BP2-201ENST00000503948 512 ntBASIC5.66□□□□□ -1.5
RFC4P35249 RNU1-45P-201ENST00000517191 141 ntBASIC5.66□□□□□ -1.5
RFC4P35249 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.66□□□□□ -1.5
RFC4P35249 MIR4444-1-201ENST00000581696 74 ntBASIC5.66□□□□□ -1.5
RFC4P35249 MIR4444-2-201ENST00000584390 74 ntBASIC5.66□□□□□ -1.5
RFC4P35249 AC140479.6-201ENST00000633535 357 ntBASIC5.66□□□□□ -1.5
RFC4P35249 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC4P35249 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC4P35249 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RFC4P35249 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC4P35249 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC4P35249 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC4P35249 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RFC4P35249 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RFC4P35249 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFC4P35249 LINC00622-201ENST00000562811 1570 ntBASIC5.65□□□□□ -1.5
RFC4P35249 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFC4P35249 AC010740.1-201ENST00000417035 684 ntBASIC5.65□□□□□ -1.5
RFC4P35249 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.65□□□□□ -1.5
RFC4P35249 CYP4F29P-201ENST00000420685 446 ntBASIC5.65□□□□□ -1.5
RFC4P35249 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.65□□□□□ -1.5
RFC4P35249 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.65□□□□□ -1.5
RFC4P35249 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.65□□□□□ -1.5
RFC4P35249 AC012671.1-201ENST00000451912 203 ntBASIC5.65□□□□□ -1.5
RFC4P35249 AC239798.3-201ENST00000454459 408 ntBASIC5.65□□□□□ -1.5
RFC4P35249 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
RFC4P35249 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.65□□□□□ -1.5
RFC4P35249 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.65□□□□□ -1.5
RFC4P35249 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.65□□□□□ -1.5
RFC4P35249 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.65□□□□□ -1.5
RFC4P35249 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.65□□□□□ -1.5
RFC4P35249 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.65□□□□□ -1.5
RFC4P35249 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
RFC4P35249 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RFC4P35249 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.65□□□□□ -1.51
RFC4P35249 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.65□□□□□ -1.51
RFC4P35249 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.65□□□□□ -1.51
RFC4P35249 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.65□□□□□ -1.51
RFC4P35249 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC4P35249 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.64□□□□□ -1.51
RFC4P35249 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC4P35249 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.64□□□□□ -1.51
RFC4P35249 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
RFC4P35249 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RFC4P35249 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC4P35249 MIR137-201ENST00000385223 102 ntBASIC5.64□□□□□ -1.51
RFC4P35249 MIR3065-201ENST00000390137 79 ntBASIC5.64□□□□□ -1.51
RFC4P35249 NRBF2P2-201ENST00000413087 861 ntBASIC5.64□□□□□ -1.51
RFC4P35249 AL356095.1-201ENST00000417217 199 ntBASIC5.64□□□□□ -1.51
RFC4P35249 AL139095.3-201ENST00000419672 1203 ntBASIC5.64□□□□□ -1.51
RFC4P35249 RPL23AP52-201ENST00000439311 478 ntBASIC5.64□□□□□ -1.51
RFC4P35249 SNRPFP2-201ENST00000440710 251 ntBASIC5.64□□□□□ -1.51
RFC4P35249 VN1R34P-201ENST00000447387 883 ntBASIC5.64□□□□□ -1.51
RFC4P35249 RPS20P4-201ENST00000461659 355 ntBASIC5.64□□□□□ -1.51
RFC4P35249 RPS27AP17-201ENST00000463344 455 ntBASIC5.64□□□□□ -1.51
RFC4P35249 RPL35P6-201ENST00000490024 372 ntBASIC5.64□□□□□ -1.51
RFC4P35249 NPM1P28-201ENST00000492269 840 ntBASIC5.64□□□□□ -1.51
RFC4P35249 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.64□□□□□ -1.51
RFC4P35249 AC008958.1-201ENST00000511047 682 ntBASIC5.64□□□□□ -1.51
RFC4P35249 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.64□□□□□ -1.51
RFC4P35249 TVP23BP1-201ENST00000557500 617 ntBASIC5.64□□□□□ -1.51
RFC4P35249 MIR4286-201ENST00000580651 93 ntBASIC5.64□□□□□ -1.51
RFC4P35249 MIR6867-201ENST00000610636 67 ntBASIC5.64□□□□□ -1.51
RFC4P35249 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC4P35249 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC4P35249 AC006840.1-201ENST00000623069 542 ntBASIC5.64□□□□□ -1.51
RFC4P35249 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC4P35249 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RFC4P35249 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.64□□□□□ -1.51
RFC4P35249 AC133552.1-201ENST00000569988 4007 ntBASIC5.64□□□□□ -1.51
RFC4P35249 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC4P35249 AC026523.2-201ENST00000625039 7739 ntBASIC5.64□□□□□ -1.51
RFC4P35249 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.64□□□□□ -1.51
RFC4P35249 AC092376.2-201ENST00000622621 4116 ntBASIC5.63□□□□□ -1.51
RFC4P35249 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC4P35249 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC4P35249 AC019072.1-201ENST00000604535 1551 ntBASIC5.63□□□□□ -1.51
RFC4P35249 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC4P35249 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RFC4P35249 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC4P35249 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC4P35249 UBBP2-201ENST00000376781 231 ntBASIC5.63□□□□□ -1.51
RFC4P35249 AC009237.10-201ENST00000414112 510 ntBASIC5.63□□□□□ -1.51
RFC4P35249 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.63□□□□□ -1.51
RFC4P35249 RPL7P2-201ENST00000427639 268 ntBASIC5.63□□□□□ -1.51
RFC4P35249 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.63□□□□□ -1.51
RFC4P35249 NFYAP1-201ENST00000431953 972 ntBASIC5.63□□□□□ -1.51
RFC4P35249 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.63□□□□□ -1.51
RFC4P35249 AC245028.2-201ENST00000458673 253 ntBASIC5.63□□□□□ -1.51
RFC4P35249 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.63□□□□□ -1.51
RFC4P35249 RNA5SP143-201ENST00000516936 115 ntBASIC5.63□□□□□ -1.51
RFC4P35249 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.63□□□□□ -1.51
RFC4P35249 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.63□□□□□ -1.51
RFC4P35249 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms