Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC044797.1-201ENST00000445744 679 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 RPS20P4-201ENST00000461659 355 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 RPS7P7-201ENST00000463499 571 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.87□□□□□ -1.31
CLIP1P30622 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP1P30622 MED28P5-201ENST00000528254 438 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.87□□□□□ -1.31
CLIP1P30622 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.87□□□□□ -1.31
CLIP1P30622 AL352979.3-201ENST00000553515 247 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.87□□□□□ -1.31
CLIP1P30622 RN7SL600P-201ENST00000581811 299 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 MIR3936-201ENST00000584304 110 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 AC006116.5-201ENST00000591936 559 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 AC097505.1-201ENST00000610199 565 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.87□□□□□ -1.31
CLIP1P30622 AP005435.3-201ENST00000531260 3198 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 TCP11X1-202ENST00000622971 1372 ntBASIC6.87□□□□□ -1.31
CLIP1P30622 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP1P30622 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP1P30622 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP1P30622 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLIP1P30622 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.86□□□□□ -1.31
CLIP1P30622 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CLIP1P30622 RNU1-85P-201ENST00000364127 164 ntBASIC6.86□□□□□ -1.31
CLIP1P30622 PEX12P1-201ENST00000400284 1048 ntBASIC6.86□□□□□ -1.31
CLIP1P30622 AL078604.1-201ENST00000404609 466 ntBASIC6.86□□□□□ -1.31
CLIP1P30622 RN7SKP33-201ENST00000410942 340 ntBASIC6.86□□□□□ -1.31
CLIP1P30622 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.86□□□□□ -1.31
CLIP1P30622 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.86□□□□□ -1.31
CLIP1P30622 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.86□□□□□ -1.31
CLIP1P30622 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.86□□□□□ -1.31
CLIP1P30622 RNA5SP360-201ENST00000516555 118 ntBASIC6.86□□□□□ -1.31
CLIP1P30622 OR8R1P-201ENST00000543943 764 ntBASIC6.86□□□□□ -1.31
CLIP1P30622 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.86□□□□□ -1.31
CLIP1P30622 TMEM30CP-203ENST00000637814 1035 ntBASIC6.86□□□□□ -1.31
CLIP1P30622 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CLIP1P30622 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP1P30622 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP1P30622 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CLIP1P30622 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP1P30622 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP1P30622 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CLIP1P30622 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP1P30622 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP1P30622 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP1P30622 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLIP1P30622 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC6.85□□□□□ -1.31
CLIP1P30622 AP001157.1-201ENST00000550837 2339 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 MUC2-202ENST00000613187 4845 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
CLIP1P30622 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP1P30622 AL035696.2-201ENST00000407941 709 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 VDAC1P9-201ENST00000412766 841 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 RPL23AP25-201ENST00000430973 463 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 AL512326.1-201ENST00000443050 721 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 SERPINA7P1-201ENST00000443077 631 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 RPS27AP15-201ENST00000447672 466 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 TPT1P1-201ENST00000458495 518 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.85□□□□□ -1.31
CLIP1P30622 PARP4P3-201ENST00000510265 317 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 AC010547.7-201ENST00000570323 333 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CLIP1P30622 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.85□□□□□ -1.31
CLIP1P30622 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.85□□□□□ -1.31
CLIP1P30622 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.85□□□□□ -1.31
CLIP1P30622 MIR92B-201ENST00000607575 96 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP1P30622 MIR7151-201ENST00000617477 60 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP1P30622 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP1P30622 AC100871.1-201ENST00000507871 1456 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 EOGT-210ENST00000615922 1931 ntBASIC6.85□□□□□ -1.31
CLIP1P30622 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP1P30622 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CLIP1P30622 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CLIP1P30622 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC6.85□□□□□ -1.31
CLIP1P30622 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
CLIP1P30622 RN7SKP224-201ENST00000364140 325 ntBASIC6.84□□□□□ -1.31
CLIP1P30622 RNA5SP175-201ENST00000364275 119 ntBASIC6.84□□□□□ -1.31
CLIP1P30622 RPL36AP36-201ENST00000418616 301 ntBASIC6.84□□□□□ -1.31
CLIP1P30622 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLIP1P30622 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.84□□□□□ -1.31
CLIP1P30622 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.84□□□□□ -1.31
CLIP1P30622 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLIP1P30622 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.84□□□□□ -1.31
CLIP1P30622 RNA5SP73-201ENST00000516744 108 ntBASIC6.84□□□□□ -1.31
CLIP1P30622 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC6.84□□□□□ -1.31
CLIP1P30622 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CLIP1P30622 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLIP1P30622 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.84□□□□□ -1.31
CLIP1P30622 BNIP3P33-201ENST00000598912 569 ntBASIC6.84□□□□□ -1.31
CLIP1P30622 AC099676.1-201ENST00000608886 657 ntBASIC6.84□□□□□ -1.31
CLIP1P30622 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.84□□□□□ -1.31
CLIP1P30622 AC104260.2-201ENST00000623551 3497 ntBASIC6.84□□□□□ -1.31
CLIP1P30622 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLIP1P30622 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CLIP1P30622 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CLIP1P30622 IQCB2P-201ENST00000401788 1633 ntBASIC6.84□□□□□ -1.31
CLIP1P30622 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.84□□□□□ -1.31
CLIP1P30622 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms