Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A5P29400 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A5P29400 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A5P29400 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.1□□□□□ -1.59
COL4A5P29400 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.1□□□□□ -1.59
COL4A5P29400 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A5P29400 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A5P29400 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A5P29400 NANOGP10-201ENST00000453325 895 ntBASIC5.1□□□□□ -1.59
COL4A5P29400 RPL23AP81-201ENST00000455252 467 ntBASIC5.1□□□□□ -1.59
COL4A5P29400 GAPDHP36-201ENST00000480688 918 ntBASIC5.1□□□□□ -1.59
COL4A5P29400 RPS4XP15-201ENST00000489210 795 ntBASIC5.1□□□□□ -1.59
COL4A5P29400 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.1□□□□□ -1.59
COL4A5P29400 AC110768.1-201ENST00000509222 400 ntBASIC5.1□□□□□ -1.59
COL4A5P29400 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A5P29400 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A5P29400 AC005520.3-201ENST00000602874 370 ntBASIC5.1□□□□□ -1.59
COL4A5P29400 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A5P29400 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.1□□□□□ -1.59
COL4A5P29400 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.1□□□□□ -1.59
COL4A5P29400 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A5P29400 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
COL4A5P29400 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A5P29400 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.1□□□□□ -1.59
COL4A5P29400 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A5P29400 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A5P29400 AL022323.4-201ENST00000623980 13120 ntBASIC5.1□□□□□ -1.59
COL4A5P29400 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A5P29400 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A5P29400 OR56B2P-201ENST00000317102 954 ntBASIC5.09□□□□□ -1.59
COL4A5P29400 RNU1-83P-201ENST00000363426 164 ntBASIC5.09□□□□□ -1.59
COL4A5P29400 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.09□□□□□ -1.59
COL4A5P29400 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A5P29400 AC097486.1-201ENST00000515331 210 ntBASIC5.09□□□□□ -1.59
COL4A5P29400 RNA5SP249-201ENST00000516127 99 ntBASIC5.09□□□□□ -1.59
COL4A5P29400 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.09□□□□□ -1.59
COL4A5P29400 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
COL4A5P29400 AC005858.4-201ENST00000623191 700 ntBASIC5.09□□□□□ -1.59
COL4A5P29400 AC015908.5-201ENST00000623289 343 ntBASIC5.09□□□□□ -1.59
COL4A5P29400 AC020978.9-201ENST00000624380 1141 ntBASIC5.09□□□□□ -1.59
COL4A5P29400 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A5P29400 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A5P29400 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
COL4A5P29400 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A5P29400 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.09□□□□□ -1.59
COL4A5P29400 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.09□□□□□ -1.59
COL4A5P29400 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL4A5P29400 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
COL4A5P29400 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.09□□□□□ -1.6
COL4A5P29400 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.09□□□□□ -1.6
COL4A5P29400 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL4A5P29400 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A5P29400 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
COL4A5P29400 RNU6-213P-201ENST00000384051 104 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 AC062016.2-201ENST00000420950 676 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 MTCO1P54-201ENST00000430139 712 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.08□□□□□ -1.6
COL4A5P29400 ACTR3P3-201ENST00000480448 893 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL4A5P29400 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.08□□□□□ -1.6
COL4A5P29400 SNORA74D-201ENST00000516404 141 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.08□□□□□ -1.6
COL4A5P29400 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A5P29400 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A5P29400 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
COL4A5P29400 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.08□□□□□ -1.6
COL4A5P29400 USP9YP4-201ENST00000424401 1745 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.08□□□□□ -1.6
COL4A5P29400 AC116667.1-201ENST00000604855 2072 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A5P29400 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A5P29400 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.08□□□□□ -1.6
COL4A5P29400 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL4A5P29400 AC091390.3-201ENST00000426478 338 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 AL353748.1-201ENST00000440753 474 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A5P29400 RPL7P49-201ENST00000471402 708 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 AP000619.3-201ENST00000535634 1127 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A5P29400 AL606490.9-201ENST00000603331 271 ntBASIC5.08□□□□□ -1.6
COL4A5P29400 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A5P29400 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
COL4A5P29400 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
COL4A5P29400 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.07□□□□□ -1.6
COL4A5P29400 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL4A5P29400 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL4A5P29400 AL592291.1-201ENST00000403830 352 ntBASIC5.07□□□□□ -1.6
COL4A5P29400 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.07□□□□□ -1.6
COL4A5P29400 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL4A5P29400 RPL5P2-201ENST00000429598 854 ntBASIC5.07□□□□□ -1.6
COL4A5P29400 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL4A5P29400 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.07□□□□□ -1.6
COL4A5P29400 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL4A5P29400 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.07□□□□□ -1.6
COL4A5P29400 AL354798.1-201ENST00000622505 329 ntBASIC5.07□□□□□ -1.6
COL4A5P29400 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.07□□□□□ -1.6
COL4A5P29400 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.07□□□□□ -1.6
COL4A5P29400 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
COL4A5P29400 MFSD8-242ENST00000641690 4199 ntBASIC5.07□□□□□ -1.6
COL4A5P29400 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms