Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 OR8X1P-201ENST00000534542 869 ntBASIC4.34□□□□□ -1.71
SHC1P29353 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.34□□□□□ -1.71
SHC1P29353 AC133555.2-201ENST00000550213 292 ntBASIC4.34□□□□□ -1.71
SHC1P29353 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.34□□□□□ -1.71
SHC1P29353 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.34□□□□□ -1.71
SHC1P29353 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.34□□□□□ -1.71
SHC1P29353 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.34□□□□□ -1.71
SHC1P29353 MIR4480-201ENST00000582492 71 ntBASIC4.34□□□□□ -1.71
SHC1P29353 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.34□□□□□ -1.71
SHC1P29353 AC022726.1-201ENST00000587475 207 ntBASIC4.34□□□□□ -1.71
SHC1P29353 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.34□□□□□ -1.71
SHC1P29353 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.34□□□□□ -1.71
SHC1P29353 AC004948.1-201ENST00000609858 672 ntBASIC4.34□□□□□ -1.71
SHC1P29353 FAM27B-201ENST00000610601 213 ntBASIC4.34□□□□□ -1.71
SHC1P29353 AL049539.1-201ENST00000611964 459 ntBASIC4.34□□□□□ -1.71
SHC1P29353 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.34□□□□□ -1.71
SHC1P29353 LINC00216-201ENST00000623548 1126 ntBASIC4.34□□□□□ -1.71
SHC1P29353 AP001784.1-201ENST00000624107 428 ntBASIC4.34□□□□□ -1.71
SHC1P29353 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.34□□□□□ -1.71
SHC1P29353 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SHC1P29353 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
SHC1P29353 NCLP2-201ENST00000416078 1462 ntBASIC4.34□□□□□ -1.71
SHC1P29353 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.34□□□□□ -1.71
SHC1P29353 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHC1P29353 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHC1P29353 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHC1P29353 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHC1P29353 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.34□□□□□ -1.71
SHC1P29353 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHC1P29353 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
SHC1P29353 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.34□□□□□ -1.72
SHC1P29353 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SHC1P29353 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SHC1P29353 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHC1P29353 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHC1P29353 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHC1P29353 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
SHC1P29353 TLK1P1-201ENST00000456760 2440 ntBASIC4.33□□□□□ -1.72
SHC1P29353 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.33□□□□□ -1.72
SHC1P29353 AL359922.3-201ENST00000624779 1670 ntBASIC4.33□□□□□ -1.72
SHC1P29353 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHC1P29353 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHC1P29353 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.33□□□□□ -1.72
SHC1P29353 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SHC1P29353 RSU1P3-201ENST00000412878 835 ntBASIC4.33□□□□□ -1.72
SHC1P29353 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.33□□□□□ -1.72
SHC1P29353 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.33□□□□□ -1.72
SHC1P29353 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.33□□□□□ -1.72
SHC1P29353 RCC2P2-201ENST00000422174 918 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.33□□□□□ -1.72
SHC1P29353 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.33□□□□□ -1.72
SHC1P29353 RPS17P8-201ENST00000434525 335 ntBASIC4.33□□□□□ -1.72
SHC1P29353 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.33□□□□□ -1.72
SHC1P29353 Z80107.2-201ENST00000445127 392 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AL645937.3-201ENST00000453647 936 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC107015.1-201ENST00000466902 747 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC092324.1-201ENST00000468671 324 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC093801.2-201ENST00000503966 1050 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC091868.1-201ENST00000508746 304 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.33□□□□□ -1.72
SHC1P29353 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.33□□□□□ -1.72
SHC1P29353 TCP11X3P-202ENST00000514289 1254 ntBASIC4.33□□□□□ -1.72
SHC1P29353 SCARNA1-201ENST00000517138 166 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.33□□□□□ -1.72
SHC1P29353 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.33□□□□□ -1.72
SHC1P29353 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHC1P29353 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.33□□□□□ -1.72
SHC1P29353 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.33□□□□□ -1.72
SHC1P29353 EDDM3DP-201ENST00000554692 434 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.33□□□□□ -1.72
SHC1P29353 RN7SL802P-201ENST00000577858 299 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.33□□□□□ -1.72
SHC1P29353 MIR3667-201ENST00000581025 74 ntBASIC4.33□□□□□ -1.72
SHC1P29353 MIR4737-201ENST00000583979 81 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.33□□□□□ -1.72
SHC1P29353 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.33□□□□□ -1.72
SHC1P29353 AC096947.1-201ENST00000603233 470 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC087283.1-201ENST00000604029 1074 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC005084.1-201ENST00000605160 304 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AL121932.1-201ENST00000605542 214 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AL450270.1-201ENST00000606160 391 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC120053.1-201ENST00000607706 736 ntBASIC4.33□□□□□ -1.72
SHC1P29353 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SHC1P29353 uc_338.18-201ENST00000615451 175 ntBASIC4.33□□□□□ -1.72
SHC1P29353 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHC1P29353 AL590410.1-201ENST00000617925 333 ntBASIC4.33□□□□□ -1.72
SHC1P29353 MIR6730-201ENST00000622213 67 ntBASIC4.33□□□□□ -1.72
SHC1P29353 AC015804.1-201ENST00000622935 435 ntBASIC4.33□□□□□ -1.72
SHC1P29353 CR381572.2-201ENST00000624852 397 ntBASIC4.33□□□□□ -1.72
SHC1P29353 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.33□□□□□ -1.72
SHC1P29353 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SHC1P29353 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.33□□□□□ -1.72
SHC1P29353 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
SHC1P29353 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
SHC1P29353 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHC1P29353 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHC1P29353 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHC1P29353 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHC1P29353 AC092435.4-201ENST00000623012 4159 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms