Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.57□□□□□ -1.68
PTPN6P29350 AC004938.1-201ENST00000438468 308 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.57□□□□□ -1.68
PTPN6P29350 AL137845.2-201ENST00000444292 988 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 HIGD1AP8-201ENST00000453927 274 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.57□□□□□ -1.68
PTPN6P29350 RPL23AP56-201ENST00000460778 453 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.57□□□□□ -1.68
PTPN6P29350 RPS27AP16-201ENST00000492222 470 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 AC140172.1-201ENST00000502928 141 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 AC108120.2-201ENST00000512973 294 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 RNU6-362P-201ENST00000516736 90 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.57□□□□□ -1.68
PTPN6P29350 AP001922.4-201ENST00000526967 290 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 OR5D15P-201ENST00000531671 942 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.57□□□□□ -1.68
PTPN6P29350 FKBP1BP1-201ENST00000553366 325 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 AL049839.1-201ENST00000556151 657 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.57□□□□□ -1.68
PTPN6P29350 AC011453.2-201ENST00000603737 729 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 AL049539.1-201ENST00000611964 459 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.57□□□□□ -1.68
PTPN6P29350 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN6P29350 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN6P29350 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.57□□□□□ -1.68
PTPN6P29350 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.57□□□□□ -1.68
PTPN6P29350 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN6P29350 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.57□□□□□ -1.68
PTPN6P29350 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PTPN6P29350 CASC19-204ENST00000641001 2055 ntBASIC4.57□□□□□ -1.68
PTPN6P29350 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PTPN6P29350 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PTPN6P29350 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 SNORA51.8-201ENST00000384234 132 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 RNU6-532P-201ENST00000384318 107 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 MIR585-201ENST00000384887 94 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN6P29350 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN6P29350 CHEK2P3-201ENST00000416118 248 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN6P29350 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 RPS26P2-201ENST00000440331 348 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 SUMO2P1-206ENST00000445436 284 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 AL157827.1-201ENST00000447622 132 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN6P29350 RNU7-27P-201ENST00000459281 62 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN6P29350 RN7SL319P-201ENST00000480656 221 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN6P29350 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN6P29350 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.56□□□□□ -1.68
PTPN6P29350 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN6P29350 AC008033.2-201ENST00000542626 177 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
PTPN6P29350 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPN6P29350 AC079075.1-201ENST00000559543 878 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPN6P29350 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.56□□□□□ -1.68
PTPN6P29350 AC093249.4-201ENST00000564755 259 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 SNORA74C-1-201ENST00000580726 201 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 MIR4436B2-201ENST00000581415 91 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 AC233702.9-201ENST00000581528 203 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 MIR4436B1-201ENST00000583272 91 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 AC011487.3-201ENST00000593607 453 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 AC135803.1-201ENST00000608748 565 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 AC097505.1-201ENST00000610199 565 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 Mico1.1-201ENST00000611698 204 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 AC012414.7-202ENST00000622705 1090 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 MAPK10-349ENST00000641767 3661 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PTPN6P29350 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 AL672167.1-203ENST00000641299 2975 ntBASIC4.56□□□□□ -1.68
PTPN6P29350 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPN6P29350 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN6P29350 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN6P29350 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN6P29350 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms