Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.05□□□□□ -1.6
TNFSF4P23510 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFSF4P23510 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TNFSF4P23510 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TNFSF4P23510 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.05□□□□□ -1.6
TNFSF4P23510 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TNFSF4P23510 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFSF4P23510 OR9K1P-202ENST00000641111 3217 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 PDZK1P1-202ENST00000425209 1350 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.04□□□□□ -1.6
TNFSF4P23510 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFSF4P23510 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
TNFSF4P23510 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TNFSF4P23510 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFSF4P23510 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFSF4P23510 RNU1-59P-201ENST00000364829 162 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 Y_RNA.311-201ENST00000365068 96 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 MIR506-201ENST00000384998 124 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 LRRC37BP1-201ENST00000398851 714 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.04□□□□□ -1.6
TNFSF4P23510 EIF4A1P3-201ENST00000411521 244 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 HMGN1P20-201ENST00000411849 300 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 MTND4P22-201ENST00000413116 1169 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.04□□□□□ -1.6
TNFSF4P23510 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFSF4P23510 RPS4XP5-201ENST00000419038 768 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFSF4P23510 BX284632.2-201ENST00000421091 399 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AL035660.1-201ENST00000422041 222 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.04□□□□□ -1.6
TNFSF4P23510 AL365220.1-201ENST00000432923 399 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AL663074.2-201ENST00000440621 479 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 PCNPP2-201ENST00000441651 455 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AL512605.1-202ENST00000441919 381 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AC023141.8-201ENST00000442554 208 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.04□□□□□ -1.6
TNFSF4P23510 HMGN1P2-201ENST00000445197 310 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AL359955.2-201ENST00000445380 353 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AC104978.1-201ENST00000449387 391 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 SDC4P-201ENST00000453285 601 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 snoU13.7-201ENST00000459220 104 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 snoU13.29-201ENST00000459370 104 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 RPL7P41-201ENST00000485823 957 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AL035690.1-201ENST00000490892 383 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 RN7SL57P-201ENST00000493687 290 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.04□□□□□ -1.6
TNFSF4P23510 MTATP6P22-201ENST00000507369 598 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.04□□□□□ -1.6
TNFSF4P23510 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.04□□□□□ -1.6
TNFSF4P23510 AC018797.3-201ENST00000513388 1241 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.04□□□□□ -1.6
TNFSF4P23510 AC005363.1-201ENST00000530779 351 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.04□□□□□ -1.6
TNFSF4P23510 PCNAP4-201ENST00000532690 730 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.04□□□□□ -1.6
TNFSF4P23510 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TNFSF4P23510 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFSF4P23510 TRAV15-201ENST00000556680 249 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AL049779.3-201ENST00000557141 606 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFSF4P23510 MIR4260-201ENST00000583107 67 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFSF4P23510 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFSF4P23510 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFSF4P23510 AL158042.1-201ENST00000605338 460 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AC145423.1-201ENST00000605712 336 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.04□□□□□ -1.6
TNFSF4P23510 AC010245.2-201ENST00000606908 1167 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AL021707.7-201ENST00000607991 416 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 MIR6861-201ENST00000618657 64 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AC098679.5-201ENST00000624394 571 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.04□□□□□ -1.6
TNFSF4P23510 AC116618.1-201ENST00000634617 774 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TNFSF4P23510 AC011978.2-201ENST00000569835 2054 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 AL360270.2-201ENST00000562952 5985 ntBASIC5.04□□□□□ -1.6
TNFSF4P23510 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TNFSF4P23510 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFSF4P23510 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFSF4P23510 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNFSF4P23510 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.03□□□□□ -1.6
TNFSF4P23510 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.03□□□□□ -1.6
TNFSF4P23510 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TNFSF4P23510 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFSF4P23510 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFSF4P23510 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFSF4P23510 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFSF4P23510 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFSF4P23510 OR4A15-201ENST00000314706 1035 ntBASIC5.03□□□□□ -1.6
TNFSF4P23510 RNU1-85P-201ENST00000364127 164 ntBASIC5.03□□□□□ -1.6
TNFSF4P23510 RNU6-921P-201ENST00000384361 107 ntBASIC5.03□□□□□ -1.6
TNFSF4P23510 RNU6-441P-201ENST00000384545 106 ntBASIC5.03□□□□□ -1.6
TNFSF4P23510 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.03□□□□□ -1.6
TNFSF4P23510 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.03□□□□□ -1.6
TNFSF4P23510 RPL35AP3-201ENST00000414680 288 ntBASIC5.03□□□□□ -1.6
TNFSF4P23510 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.03□□□□□ -1.6
TNFSF4P23510 RPS3AP9-201ENST00000417027 792 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms