Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 ELF2P3-201ENST00000445099 1506 ntBASIC5.74□□□□□ -1.49
ATF4P18848 SAMMSON-213ENST00000641336 1521 ntBASIC5.74□□□□□ -1.49
ATF4P18848 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.74□□□□□ -1.49
ATF4P18848 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.74□□□□□ -1.49
ATF4P18848 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.74□□□□□ -1.49
ATF4P18848 AOX3P-204ENST00000491025 2107 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 OR9K1P-201ENST00000326513 941 ntBASIC5.74□□□□□ -1.49
ATF4P18848 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ATF4P18848 MAML3-201ENST00000398940 831 ntTSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 GSTA9P-201ENST00000406231 611 ntBASIC5.74□□□□□ -1.49
ATF4P18848 GAS8-AS1-201ENST00000408886 435 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 BX295541.1-201ENST00000417774 250 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AC008065.1-201ENST00000428525 348 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AL596276.1-201ENST00000434465 418 ntBASIC5.74□□□□□ -1.49
ATF4P18848 CLUHP1-201ENST00000435012 1190 ntBASIC5.74□□□□□ -1.49
ATF4P18848 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.74□□□□□ -1.49
ATF4P18848 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 AC002553.1-201ENST00000442828 802 ntBASIC5.74□□□□□ -1.49
ATF4P18848 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC5.74□□□□□ -1.49
ATF4P18848 AP000281.1-201ENST00000444036 316 ntBASIC5.74□□□□□ -1.49
ATF4P18848 RPL7P52-201ENST00000449200 742 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.74□□□□□ -1.49
ATF4P18848 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.74□□□□□ -1.49
ATF4P18848 AP1S2P1-201ENST00000457344 379 ntBASIC5.74□□□□□ -1.49
ATF4P18848 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 RN7SL19P-201ENST00000462522 306 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.74□□□□□ -1.49
ATF4P18848 AC022034.3-201ENST00000471393 478 ntBASIC5.74□□□□□ -1.49
ATF4P18848 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.74□□□□□ -1.49
ATF4P18848 RN7SL124P-201ENST00000498656 285 ntBASIC5.74□□□□□ -1.49
ATF4P18848 HMGB1P21-201ENST00000502313 581 ntBASIC5.74□□□□□ -1.49
ATF4P18848 KCTD9P5-201ENST00000504141 1170 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 AC114801.1-201ENST00000512633 297 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 AC093677.1-201ENST00000514414 678 ntBASIC5.74□□□□□ -1.49
ATF4P18848 RNU6-201P-201ENST00000517100 61 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC5.74□□□□□ -1.49
ATF4P18848 AC024224.1-201ENST00000538284 609 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.74□□□□□ -1.49
ATF4P18848 CENPUP2-201ENST00000555897 1186 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AL390334.1-201ENST00000556395 450 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.74□□□□□ -1.49
ATF4P18848 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.74□□□□□ -1.49
ATF4P18848 ULK4P1-202ENST00000565174 503 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.74□□□□□ -1.49
ATF4P18848 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 ANKRD20A19P-203ENST00000602724 295 ntBASIC5.74□□□□□ -1.49
ATF4P18848 DUXAP4-201ENST00000603046 613 ntBASIC5.74□□□□□ -1.49
ATF4P18848 PRR13P3-201ENST00000603578 376 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AC025588.3-201ENST00000604182 274 ntBASIC5.74□□□□□ -1.49
ATF4P18848 OR10AB1P-201ENST00000609613 938 ntBASIC5.74□□□□□ -1.49
ATF4P18848 AL122125.1-201ENST00000616999 600 ntBASIC5.74□□□□□ -1.49
ATF4P18848 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ATF4P18848 AC136475.10-201ENST00000620253 385 ntBASIC5.74□□□□□ -1.49
ATF4P18848 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 AC011369.2-201ENST00000624423 1567 ntBASIC5.74□□□□□ -1.49
ATF4P18848 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ATF4P18848 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATF4P18848 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
ATF4P18848 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATF4P18848 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ATF4P18848 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
ATF4P18848 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.73□□□□□ -1.49
ATF4P18848 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATF4P18848 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATF4P18848 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATF4P18848 GNG5P1-201ENST00000255500 204 ntBASIC5.73□□□□□ -1.49
ATF4P18848 FRG1BP-201ENST00000278882 761 ntBASIC5.73□□□□□ -1.49
ATF4P18848 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.73□□□□□ -1.49
ATF4P18848 PPIAP22-201ENST00000358455 498 ntBASIC5.73□□□□□ -1.49
ATF4P18848 RN7SKP174-201ENST00000363803 330 ntBASIC5.73□□□□□ -1.49
ATF4P18848 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATF4P18848 AC069213.2-201ENST00000420238 366 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms