Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.95□□□□□ -1.62
TPM1P09493 AL391361.1-201ENST00000405580 489 ntBASIC4.95□□□□□ -1.62
TPM1P09493 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.95□□□□□ -1.62
TPM1P09493 AC140479.3-201ENST00000418944 1126 ntBASIC4.95□□□□□ -1.62
TPM1P09493 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.95□□□□□ -1.62
TPM1P09493 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.95□□□□□ -1.62
TPM1P09493 OR2B7P-201ENST00000429302 934 ntBASIC4.95□□□□□ -1.62
TPM1P09493 AC002069.1-201ENST00000429649 1159 ntBASIC4.95□□□□□ -1.62
TPM1P09493 AC097523.2-201ENST00000435551 652 ntBASIC4.95□□□□□ -1.62
TPM1P09493 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.95□□□□□ -1.62
TPM1P09493 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.95□□□□□ -1.62
TPM1P09493 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TPM1P09493 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TPM1P09493 DDX39BP2-208ENST00000453923 258 ntBASIC4.95□□□□□ -1.62
TPM1P09493 RPL36AP41-201ENST00000493820 306 ntBASIC4.95□□□□□ -1.62
TPM1P09493 SCARNA22-201ENST00000503991 125 ntBASIC4.95□□□□□ -1.62
TPM1P09493 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TPM1P09493 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.95□□□□□ -1.62
TPM1P09493 NDUFB4P12-201ENST00000513465 390 ntBASIC4.95□□□□□ -1.62
TPM1P09493 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TPM1P09493 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.95□□□□□ -1.62
TPM1P09493 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.95□□□□□ -1.62
TPM1P09493 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.95□□□□□ -1.62
TPM1P09493 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.95□□□□□ -1.62
TPM1P09493 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TPM1P09493 MIR3691-201ENST00000578066 90 ntBASIC4.95□□□□□ -1.62
TPM1P09493 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.95□□□□□ -1.62
TPM1P09493 BNIP3P32-201ENST00000600015 554 ntBASIC4.95□□□□□ -1.62
TPM1P09493 AC090948.2-201ENST00000607363 564 ntBASIC4.95□□□□□ -1.62
TPM1P09493 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.95□□□□□ -1.62
TPM1P09493 AL356274.1-201ENST00000617064 410 ntBASIC4.95□□□□□ -1.62
TPM1P09493 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.95□□□□□ -1.62
TPM1P09493 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.95□□□□□ -1.62
TPM1P09493 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TPM1P09493 MAPK10-304ENST00000641341 3984 ntBASIC4.95□□□□□ -1.62
TPM1P09493 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.95□□□□□ -1.62
TPM1P09493 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TPM1P09493 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TPM1P09493 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TPM1P09493 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TPM1P09493 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TPM1P09493 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
TPM1P09493 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TPM1P09493 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.94□□□□□ -1.62
TPM1P09493 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TPM1P09493 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TPM1P09493 RNU6-673P-201ENST00000365084 104 ntBASIC4.94□□□□□ -1.62
TPM1P09493 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.94□□□□□ -1.62
TPM1P09493 RNA5SP39-201ENST00000411245 120 ntBASIC4.94□□□□□ -1.62
TPM1P09493 RAC1P3-201ENST00000416129 580 ntBASIC4.94□□□□□ -1.62
TPM1P09493 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.94□□□□□ -1.62
TPM1P09493 YWHAEP5-201ENST00000431545 765 ntBASIC4.94□□□□□ -1.62
TPM1P09493 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.94□□□□□ -1.62
TPM1P09493 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.94□□□□□ -1.62
TPM1P09493 AC073850.1-201ENST00000449243 255 ntBASIC4.94□□□□□ -1.62
TPM1P09493 AL356390.1-201ENST00000455684 397 ntBASIC4.94□□□□□ -1.62
TPM1P09493 snoU13.20-201ENST00000459180 104 ntBASIC4.94□□□□□ -1.62
TPM1P09493 SYT14P1-201ENST00000481459 721 ntBASIC4.94□□□□□ -1.62
TPM1P09493 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
TPM1P09493 GCSHP4-201ENST00000538792 439 ntBASIC4.94□□□□□ -1.62
TPM1P09493 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.94□□□□□ -1.62
TPM1P09493 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.94□□□□□ -1.62
TPM1P09493 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.94□□□□□ -1.62
TPM1P09493 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.94□□□□□ -1.62
TPM1P09493 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.94□□□□□ -1.62
TPM1P09493 AC011445.2-201ENST00000599274 173 ntBASIC4.94□□□□□ -1.62
TPM1P09493 BPIFA4P-203ENST00000603168 689 ntBASIC4.94□□□□□ -1.62
TPM1P09493 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.94□□□□□ -1.62
TPM1P09493 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.94□□□□□ -1.62
TPM1P09493 AC112694.2-201ENST00000623697 768 ntBASIC4.94□□□□□ -1.62
TPM1P09493 U3.53-201ENST00000628922 216 ntBASIC4.94□□□□□ -1.62
TPM1P09493 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.94□□□□□ -1.62
TPM1P09493 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TPM1P09493 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TPM1P09493 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TPM1P09493 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TPM1P09493 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TPM1P09493 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
TPM1P09493 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TPM1P09493 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.93□□□□□ -1.62
TPM1P09493 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.93□□□□□ -1.62
TPM1P09493 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TPM1P09493 MFSD8-242ENST00000641690 4199 ntBASIC4.93□□□□□ -1.62
TPM1P09493 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.93□□□□□ -1.62
TPM1P09493 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TPM1P09493 RNU1-106P-201ENST00000384382 164 ntBASIC4.93□□□□□ -1.62
TPM1P09493 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.93□□□□□ -1.62
TPM1P09493 SMC4P1-201ENST00000414479 527 ntBASIC4.93□□□□□ -1.62
TPM1P09493 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.93□□□□□ -1.62
TPM1P09493 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.93□□□□□ -1.62
TPM1P09493 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.93□□□□□ -1.62
TPM1P09493 ELOCP8-201ENST00000439309 332 ntBASIC4.93□□□□□ -1.62
TPM1P09493 AL357520.1-201ENST00000441557 453 ntBASIC4.93□□□□□ -1.62
TPM1P09493 ELOCP15-201ENST00000442090 332 ntBASIC4.93□□□□□ -1.62
TPM1P09493 EIF4A1P11-201ENST00000451239 222 ntBASIC4.93□□□□□ -1.62
TPM1P09493 AC139783.2-201ENST00000504847 1145 ntBASIC4.93□□□□□ -1.62
TPM1P09493 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.93□□□□□ -1.62
TPM1P09493 SCARNA21.2-201ENST00000516600 166 ntBASIC4.93□□□□□ -1.62
TPM1P09493 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.93□□□□□ -1.62
TPM1P09493 HAUS8P1-201ENST00000549005 542 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms