Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC091953.3-201ENST00000623220 236 ntBASIC4.04□□□□□ -1.76
HLA-DPB1P04440 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HLA-DPB1P04440 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 MTND4P26-201ENST00000415971 1359 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AL391684.1-202ENST00000641293 1636 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 RNU6-697P-201ENST00000363348 107 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 Z98745.1-201ENST00000402553 494 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 OR51B3P-201ENST00000412287 913 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 CASKP1-201ENST00000412870 582 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 TRIM60P17-201ENST00000415181 719 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 CDY14P-201ENST00000431260 1014 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 CDY12P-201ENST00000440679 1015 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 CDY13P-201ENST00000445813 1015 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 CDY23P-201ENST00000451661 1014 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AC092324.1-201ENST00000468671 324 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AC105233.1-201ENST00000498840 781 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 UBE2FP2-201ENST00000566646 462 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 MIR4480-201ENST00000582492 71 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AC007448.1-201ENST00000582714 234 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AL031666.3-201ENST00000609320 1006 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 Mico1.1-201ENST00000611698 204 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AC107905.1-201ENST00000616204 426 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AL158196.1-201ENST00000616786 434 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 AF117829.2-201ENST00000619538 361 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 MIR6853-201ENST00000619642 74 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 NXPH1-205ENST00000602349 1953 ntBASIC4.03□□□□□ -1.76
HLA-DPB1P04440 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DPB1P04440 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 MIR137-201ENST00000385223 102 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 MIR513A2-201ENST00000385249 127 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 RN7SKP100-201ENST00000411258 284 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 RPS23P10-201ENST00000416185 486 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AL360081.1-201ENST00000428299 555 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 BX119904.1-201ENST00000432026 348 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AC005154.2-201ENST00000438110 379 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AC105918.1-201ENST00000474399 838 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 SCARNA22-201ENST00000503991 125 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AC147055.1-201ENST00000509261 750 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 RNU2-30P-201ENST00000516209 141 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 MIR4737-201ENST00000583979 81 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AL139395.1-201ENST00000603662 160 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AL391358.1-201ENST00000605342 190 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AP001784.1-201ENST00000624107 428 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AC010928.1-201ENST00000592477 1447 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 AC097504.1-201ENST00000515103 2415 ntBASIC4.02□□□□□ -1.77
HLA-DPB1P04440 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DPB1P04440 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms