Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL035079.1-201ENST00000405210 287 ntBASIC4.88□□□□□ -1.63
LDLRP01130 AL390316.1-201ENST00000406279 553 ntBASIC4.88□□□□□ -1.63
LDLRP01130 RNU4-27P-201ENST00000410889 139 ntBASIC4.88□□□□□ -1.63
LDLRP01130 SETP15-201ENST00000412724 337 ntBASIC4.88□□□□□ -1.63
LDLRP01130 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.88□□□□□ -1.63
LDLRP01130 AL450263.2-201ENST00000439400 589 ntBASIC4.88□□□□□ -1.63
LDLRP01130 RPL31P44-201ENST00000447680 377 ntBASIC4.88□□□□□ -1.63
LDLRP01130 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.88□□□□□ -1.63
LDLRP01130 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 RN7SL423P-201ENST00000486202 304 ntBASIC4.88□□□□□ -1.63
LDLRP01130 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.88□□□□□ -1.63
LDLRP01130 NAMPTP2-201ENST00000505629 1115 ntBASIC4.88□□□□□ -1.63
LDLRP01130 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.88□□□□□ -1.63
LDLRP01130 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.88□□□□□ -1.63
LDLRP01130 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LDLRP01130 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.88□□□□□ -1.63
LDLRP01130 AGGF1P9-201ENST00000561884 913 ntBASIC4.88□□□□□ -1.63
LDLRP01130 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.88□□□□□ -1.63
LDLRP01130 CBX3P2-202ENST00000583365 535 ntBASIC4.88□□□□□ -1.63
LDLRP01130 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.88□□□□□ -1.63
LDLRP01130 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.88□□□□□ -1.63
LDLRP01130 AC005252.1-201ENST00000604518 1063 ntBASIC4.88□□□□□ -1.63
LDLRP01130 AL451064.1-201ENST00000607718 471 ntBASIC4.88□□□□□ -1.63
LDLRP01130 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.88□□□□□ -1.63
LDLRP01130 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.88□□□□□ -1.63
LDLRP01130 AP000943.4-201ENST00000622912 357 ntBASIC4.88□□□□□ -1.63
LDLRP01130 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.88□□□□□ -1.63
LDLRP01130 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LDLRP01130 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LDLRP01130 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.88□□□□□ -1.63
LDLRP01130 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LDLRP01130 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.88□□□□□ -1.63
LDLRP01130 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.88□□□□□ -1.63
LDLRP01130 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LDLRP01130 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LDLRP01130 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.87□□□□□ -1.63
LDLRP01130 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LDLRP01130 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDLRP01130 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.87□□□□□ -1.63
LDLRP01130 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
LDLRP01130 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDLRP01130 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDLRP01130 RNA5SP123-201ENST00000363244 119 ntBASIC4.87□□□□□ -1.63
LDLRP01130 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDLRP01130 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LDLRP01130 RPS4XP9-201ENST00000405151 780 ntBASIC4.87□□□□□ -1.63
LDLRP01130 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.87□□□□□ -1.63
LDLRP01130 U3.32-201ENST00000408116 212 ntBASIC4.87□□□□□ -1.63
LDLRP01130 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 COX6CP17-201ENST00000421389 185 ntBASIC4.87□□□□□ -1.63
LDLRP01130 AC012519.1-201ENST00000424588 610 ntBASIC4.87□□□□□ -1.63
LDLRP01130 C4BPAP2-201ENST00000428434 478 ntBASIC4.87□□□□□ -1.63
LDLRP01130 AC009238.2-201ENST00000431026 355 ntBASIC4.87□□□□□ -1.63
LDLRP01130 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 AL161722.2-201ENST00000434731 981 ntBASIC4.87□□□□□ -1.63
LDLRP01130 GSTM5P1-201ENST00000434751 660 ntBASIC4.87□□□□□ -1.63
LDLRP01130 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.87□□□□□ -1.63
LDLRP01130 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.87□□□□□ -1.63
LDLRP01130 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.87□□□□□ -1.63
LDLRP01130 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.87□□□□□ -1.63
LDLRP01130 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.87□□□□□ -1.63
LDLRP01130 NDUFA5P9-201ENST00000472609 340 ntBASIC4.87□□□□□ -1.63
LDLRP01130 SYT14P1-201ENST00000481459 721 ntBASIC4.87□□□□□ -1.63
LDLRP01130 RN7SL591P-201ENST00000496150 292 ntBASIC4.87□□□□□ -1.63
LDLRP01130 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.87□□□□□ -1.63
LDLRP01130 CDH12P2-201ENST00000504393 298 ntBASIC4.87□□□□□ -1.63
LDLRP01130 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.87□□□□□ -1.63
LDLRP01130 HMGB1P44-201ENST00000508597 572 ntBASIC4.87□□□□□ -1.63
LDLRP01130 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.87□□□□□ -1.63
LDLRP01130 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.87□□□□□ -1.63
LDLRP01130 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.87□□□□□ -1.63
LDLRP01130 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.87□□□□□ -1.63
LDLRP01130 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.87□□□□□ -1.63
LDLRP01130 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LDLRP01130 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 RPL10P14-201ENST00000565265 298 ntBASIC4.87□□□□□ -1.63
LDLRP01130 AC011447.4-201ENST00000587562 111 ntBASIC4.87□□□□□ -1.63
LDLRP01130 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.87□□□□□ -1.63
LDLRP01130 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.87□□□□□ -1.63
LDLRP01130 AC234771.5-201ENST00000600161 514 ntBASIC4.87□□□□□ -1.63
LDLRP01130 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.87□□□□□ -1.63
LDLRP01130 MIR8084-201ENST00000614105 89 ntBASIC4.87□□□□□ -1.63
LDLRP01130 MIR8069-1-201ENST00000616627 86 ntBASIC4.87□□□□□ -1.63
LDLRP01130 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.87□□□□□ -1.63
LDLRP01130 MIR8069-2-201ENST00000621412 86 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms