Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AL390334.1-201ENST00000556395 450 ntBASIC5.73□□□□□ -1.49
MBD4O95243 AL109741.3-201ENST00000561748 592 ntBASIC5.73□□□□□ -1.49
MBD4O95243 AC079148.1-201ENST00000565944 819 ntBASIC5.73□□□□□ -1.49
MBD4O95243 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.73□□□□□ -1.49
MBD4O95243 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.73□□□□□ -1.49
MBD4O95243 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.73□□□□□ -1.49
MBD4O95243 MIR6820-201ENST00000611508 62 ntBASIC5.73□□□□□ -1.49
MBD4O95243 AL512506.1-201ENST00000613918 449 ntBASIC5.73□□□□□ -1.49
MBD4O95243 uc_338.18-201ENST00000615451 175 ntBASIC5.73□□□□□ -1.49
MBD4O95243 AC245389.2-201ENST00000616023 576 ntBASIC5.73□□□□□ -1.49
MBD4O95243 AC242843.1-201ENST00000618702 573 ntBASIC5.73□□□□□ -1.49
MBD4O95243 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.73□□□□□ -1.49
MBD4O95243 FRG1DP-201ENST00000635586 771 ntBASIC5.73□□□□□ -1.49
MBD4O95243 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
MBD4O95243 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.73□□□□□ -1.49
MBD4O95243 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MBD4O95243 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MBD4O95243 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.73□□□□□ -1.49
MBD4O95243 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
MBD4O95243 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MBD4O95243 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
MBD4O95243 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.72□□□□□ -1.49
MBD4O95243 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MBD4O95243 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.72□□□□□ -1.49
MBD4O95243 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.72□□□□□ -1.49
MBD4O95243 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.72□□□□□ -1.49
MBD4O95243 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.72□□□□□ -1.49
MBD4O95243 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.72□□□□□ -1.49
MBD4O95243 FABP7P2-201ENST00000429946 379 ntBASIC5.72□□□□□ -1.49
MBD4O95243 AL451139.1-201ENST00000434718 346 ntBASIC5.72□□□□□ -1.49
MBD4O95243 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.72□□□□□ -1.49
MBD4O95243 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.72□□□□□ -1.49
MBD4O95243 RPS29P22-201ENST00000472363 168 ntBASIC5.72□□□□□ -1.49
MBD4O95243 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.72□□□□□ -1.49
MBD4O95243 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
MBD4O95243 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.72□□□□□ -1.49
MBD4O95243 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MBD4O95243 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.72□□□□□ -1.49
MBD4O95243 AC027338.1-201ENST00000514840 825 ntBASIC5.72□□□□□ -1.49
MBD4O95243 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.72□□□□□ -1.49
MBD4O95243 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MBD4O95243 AP003049.1-201ENST00000529418 457 ntBASIC5.72□□□□□ -1.49
MBD4O95243 OSBPL9P3-201ENST00000534523 595 ntBASIC5.72□□□□□ -1.49
MBD4O95243 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.72□□□□□ -1.49
MBD4O95243 MTND4LP25-201ENST00000570218 163 ntBASIC5.72□□□□□ -1.49
MBD4O95243 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.72□□□□□ -1.49
MBD4O95243 AC068790.7-201ENST00000602347 528 ntBASIC5.72□□□□□ -1.49
MBD4O95243 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.72□□□□□ -1.49
MBD4O95243 AP001033.2-201ENST00000609701 1003 ntBASIC5.72□□□□□ -1.49
MBD4O95243 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.72□□□□□ -1.49
MBD4O95243 AL136295.6-201ENST00000610486 658 ntBASIC5.72□□□□□ -1.49
MBD4O95243 BNIP3P41-202ENST00000616656 861 ntBASIC5.72□□□□□ -1.49
MBD4O95243 AC024023.1-201ENST00000624530 922 ntBASIC5.72□□□□□ -1.49
MBD4O95243 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.72□□□□□ -1.49
MBD4O95243 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MBD4O95243 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MBD4O95243 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MBD4O95243 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MBD4O95243 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MBD4O95243 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MBD4O95243 AC093311.1-201ENST00000506586 2021 ntBASIC5.72□□□□□ -1.49
MBD4O95243 AC009313.2-201ENST00000417893 1941 ntBASIC5.72□□□□□ -1.49
MBD4O95243 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MBD4O95243 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
MBD4O95243 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
MBD4O95243 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
MBD4O95243 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.71□□□□□ -1.5
MBD4O95243 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
MBD4O95243 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.71□□□□□ -1.5
MBD4O95243 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
MBD4O95243 RNA5SP505-201ENST00000364748 108 ntBASIC5.71□□□□□ -1.5
MBD4O95243 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
MBD4O95243 RNU6-452P-201ENST00000384406 107 ntBASIC5.71□□□□□ -1.5
MBD4O95243 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
MBD4O95243 AC048351.1-201ENST00000420064 602 ntBASIC5.71□□□□□ -1.5
MBD4O95243 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.71□□□□□ -1.5
MBD4O95243 BTF3P6-201ENST00000448054 499 ntBASIC5.71□□□□□ -1.5
MBD4O95243 AC079168.2-201ENST00000453977 416 ntBASIC5.71□□□□□ -1.5
MBD4O95243 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.71□□□□□ -1.5
MBD4O95243 NPM1P29-201ENST00000483112 803 ntBASIC5.71□□□□□ -1.5
MBD4O95243 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.71□□□□□ -1.5
MBD4O95243 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.71□□□□□ -1.5
MBD4O95243 RNA5SP228-201ENST00000516232 133 ntBASIC5.71□□□□□ -1.5
MBD4O95243 RNU1-6P-201ENST00000516290 144 ntBASIC5.71□□□□□ -1.5
MBD4O95243 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.71□□□□□ -1.5
MBD4O95243 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.71□□□□□ -1.5
MBD4O95243 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.71□□□□□ -1.5
MBD4O95243 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.71□□□□□ -1.5
MBD4O95243 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.71□□□□□ -1.5
MBD4O95243 AP006289.1-201ENST00000538089 277 ntBASIC5.71□□□□□ -1.5
MBD4O95243 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.71□□□□□ -1.5
MBD4O95243 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.71□□□□□ -1.5
MBD4O95243 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.71□□□□□ -1.5
MBD4O95243 AL110118.1-201ENST00000553543 400 ntBASIC5.71□□□□□ -1.5
MBD4O95243 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.71□□□□□ -1.5
MBD4O95243 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.71□□□□□ -1.5
MBD4O95243 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.71□□□□□ -1.5
MBD4O95243 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.71□□□□□ -1.5
MBD4O95243 AP005262.1-201ENST00000582646 997 ntBASIC5.71□□□□□ -1.5
MBD4O95243 AC124856.1-201ENST00000600819 896 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms