Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.52□□□□□ -1.69
SHOX2O60902 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.52□□□□□ -1.69
SHOX2O60902 AL591363.1-201ENST00000450091 483 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.52□□□□□ -1.69
SHOX2O60902 HMGN2P25-201ENST00000486956 268 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 AC024558.1-201ENST00000505008 528 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 AC093763.2-201ENST00000505334 1223 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 AC006499.3-201ENST00000506077 748 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.52□□□□□ -1.69
SHOX2O60902 AP002981.1-201ENST00000517692 975 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.52□□□□□ -1.69
SHOX2O60902 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.52□□□□□ -1.69
SHOX2O60902 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.52□□□□□ -1.69
SHOX2O60902 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.52□□□□□ -1.69
SHOX2O60902 AC018552.1-201ENST00000562099 811 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.52□□□□□ -1.69
SHOX2O60902 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.52□□□□□ -1.69
SHOX2O60902 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.52□□□□□ -1.69
SHOX2O60902 AC095055.1-201ENST00000603472 1113 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 AL160290.3-201ENST00000604869 165 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.52□□□□□ -1.69
SHOX2O60902 AC126915.2-201ENST00000610957 190 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 AC019278.1-201ENST00000623516 479 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 AC138907.10-201ENST00000623708 983 ntBASIC4.52□□□□□ -1.69
SHOX2O60902 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHOX2O60902 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHOX2O60902 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SHOX2O60902 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.52□□□□□ -1.69
SHOX2O60902 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.52□□□□□ -1.69
SHOX2O60902 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHOX2O60902 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SHOX2O60902 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHOX2O60902 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHOX2O60902 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHOX2O60902 AC139769.1-204ENST00000472297 1931 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHOX2O60902 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SHOX2O60902 MIR141-201ENST00000384975 95 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SHOX2O60902 RNU1-82P-201ENST00000390851 165 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 RPEP2-201ENST00000432149 701 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.51□□□□□ -1.69
SHOX2O60902 AL606490.1-201ENST00000452266 765 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 HIGD1AP8-201ENST00000453927 274 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.51□□□□□ -1.69
SHOX2O60902 RN7SL222P-201ENST00000476452 299 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 RPL7P39-201ENST00000481157 744 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.51□□□□□ -1.69
SHOX2O60902 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHOX2O60902 AC098799.3-201ENST00000506095 438 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 MRPS33P2-201ENST00000507850 322 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 RNU1-6P-201ENST00000516290 144 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.51□□□□□ -1.69
SHOX2O60902 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHOX2O60902 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.51□□□□□ -1.69
SHOX2O60902 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.51□□□□□ -1.69
SHOX2O60902 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.51□□□□□ -1.69
SHOX2O60902 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHOX2O60902 AC022726.1-201ENST00000587475 207 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 BNIP3P22-201ENST00000593399 556 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.51□□□□□ -1.69
SHOX2O60902 BPIFA4P-203ENST00000603168 689 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.51□□□□□ -1.69
SHOX2O60902 AC016252.1-201ENST00000609721 474 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 Mico1.1-201ENST00000611698 204 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 RN7SL722P-201ENST00000617780 284 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 RN7SL565P-201ENST00000618246 284 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.51□□□□□ -1.69
SHOX2O60902 AP001005.3-201ENST00000622049 129 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 AC004808.2-201ENST00000627965 773 ntBASIC4.51□□□□□ -1.69
SHOX2O60902 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.51□□□□□ -1.69
SHOX2O60902 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SHOX2O60902 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHOX2O60902 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SHOX2O60902 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.51□□□□□ -1.69
SHOX2O60902 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHOX2O60902 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
SHOX2O60902 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.51□□□□□ -1.69
SHOX2O60902 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.51□□□□□ -1.69
SHOX2O60902 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.51□□□□□ -1.69
SHOX2O60902 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHOX2O60902 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
SHOX2O60902 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHOX2O60902 AC010132.2-201ENST00000295493 1043 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 U3.30-201ENST00000391308 210 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 AL645927.1-201ENST00000396783 406 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHOX2O60902 AC106901.1-201ENST00000425086 698 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 TPTE2P3-201ENST00000441562 1189 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.5□□□□□ -1.69
SHOX2O60902 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.5□□□□□ -1.69
SHOX2O60902 PTMAP3-201ENST00000447474 330 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 AC114982.2-201ENST00000461396 358 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 OR2AO1P-201ENST00000476497 403 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 RPS18P6-201ENST00000476880 458 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 AC006517.1-201ENST00000480485 328 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 PRELID3BP5-201ENST00000508612 460 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 AC091868.1-201ENST00000508746 304 ntBASIC4.5□□□□□ -1.69
SHOX2O60902 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms