Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
DDX39AO00148 AC021146.4-201ENST00000309229 279 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 IGKV7-3-201ENST00000357453 298 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 AL080315.1-201ENST00000406055 466 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
DDX39AO00148 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.22□□□□□ -1.57
DDX39AO00148 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 TMBIM7P-201ENST00000418074 855 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 RPL23AP1-201ENST00000428990 471 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 MTCO1P57-201ENST00000432182 261 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DDX39AO00148 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.22□□□□□ -1.57
DDX39AO00148 AL157827.1-201ENST00000447622 132 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.22□□□□□ -1.57
DDX39AO00148 MTND2P28-201ENST00000457540 1044 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.22□□□□□ -1.57
DDX39AO00148 AC007016.1-201ENST00000512110 244 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 AC108471.1-201ENST00000513977 287 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.22□□□□□ -1.57
DDX39AO00148 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.22□□□□□ -1.57
DDX39AO00148 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.22□□□□□ -1.57
DDX39AO00148 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.22□□□□□ -1.57
DDX39AO00148 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.22□□□□□ -1.57
DDX39AO00148 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.22□□□□□ -1.57
DDX39AO00148 RPL12P25-202ENST00000598100 674 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 AC073111.2-201ENST00000605657 1075 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.22□□□□□ -1.57
DDX39AO00148 MIR378J-201ENST00000611988 109 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 AC015914.2-201ENST00000618167 288 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 AC015908.5-201ENST00000623289 343 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 AL049536.1-201ENST00000625043 744 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 MIR7641-1-201ENST00000627518 61 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 OR5AC4P-202ENST00000642086 985 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
DDX39AO00148 AC008079.2-201ENST00000623543 20396 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.22□□□□□ -1.57
DDX39AO00148 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.22□□□□□ -1.57
DDX39AO00148 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
DDX39AO00148 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.22□□□□□ -1.57
DDX39AO00148 KARSP3-201ENST00000571212 1504 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.22□□□□□ -1.57
DDX39AO00148 AL731532.2-201ENST00000623542 1953 ntBASIC5.22□□□□□ -1.57
DDX39AO00148 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DDX39AO00148 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.22□□□□□ -1.57
DDX39AO00148 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
DDX39AO00148 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
DDX39AO00148 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
DDX39AO00148 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
DDX39AO00148 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
DDX39AO00148 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.57
DDX39AO00148 AP005435.3-201ENST00000531260 3198 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AL022322.2-201ENST00000624072 20397 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
DDX39AO00148 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.21□□□□□ -1.58
DDX39AO00148 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.21□□□□□ -1.58
DDX39AO00148 MIR659-201ENST00000384963 97 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 RPS3AP23-201ENST00000401762 784 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AP000580.1-201ENST00000404439 358 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.21□□□□□ -1.58
DDX39AO00148 UQCRBP1-201ENST00000421129 336 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.21□□□□□ -1.58
DDX39AO00148 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AC012512.1-201ENST00000446594 718 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.21□□□□□ -1.58
DDX39AO00148 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.21□□□□□ -1.58
DDX39AO00148 AP002345.1-201ENST00000456493 928 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
DDX39AO00148 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.21□□□□□ -1.58
DDX39AO00148 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.21□□□□□ -1.58
DDX39AO00148 AC025164.1-201ENST00000496249 478 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
DDX39AO00148 AC021087.2-201ENST00000504656 1203 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.21□□□□□ -1.58
DDX39AO00148 AC098799.3-201ENST00000506095 438 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.21□□□□□ -1.58
DDX39AO00148 HMGB1P47-201ENST00000511281 589 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.21□□□□□ -1.58
DDX39AO00148 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.21□□□□□ -1.58
DDX39AO00148 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.21□□□□□ -1.58
DDX39AO00148 AC068714.1-201ENST00000559623 800 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AC069061.3-201ENST00000582254 823 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 MIR4715-201ENST00000584117 79 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.21□□□□□ -1.58
DDX39AO00148 AC100847.1-201ENST00000611316 481 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AL137100.1-201ENST00000556703 1620 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AL391684.1-202ENST00000641293 1636 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 OR14L1P-202ENST00000641545 3009 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AL672167.1-204ENST00000641875 3017 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 AP000756.2-201ENST00000624168 2567 ntBASIC5.21□□□□□ -1.58
DDX39AO00148 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
DDX39AO00148 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.21□□□□□ -1.58
DDX39AO00148 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
DDX39AO00148 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
DDX39AO00148 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
DDX39AO00148 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
DDX39AO00148 AL603750.1-201ENST00000624216 1717 ntBASIC5.2□□□□□ -1.58
DDX39AO00148 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
DDX39AO00148 AL031119.1-201ENST00000404707 1879 ntBASIC5.2□□□□□ -1.58
DDX39AO00148 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms