Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR130B-202ENST00000385018 82 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 MTHFD2P2-201ENST00000407725 247 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC099782.1-201ENST00000425889 474 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 NPM1P26-201ENST00000426339 738 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 RAB9AP5-201ENST00000437794 597 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 RAB9AP2-201ENST00000443911 597 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 OR1H1P-201ENST00000448731 937 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 MTCO3P16-201ENST00000454456 754 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 RPS17P2-201ENST00000461663 408 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC079804.1-201ENST00000461922 436 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 RPL23AP44-201ENST00000482216 473 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC011037.1-201ENST00000483964 558 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 RN7SL193P-201ENST00000491708 276 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC098799.3-201ENST00000506095 438 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 RN7SKP260-201ENST00000516907 149 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 BTG1P1-201ENST00000540396 508 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC025260.1-201ENST00000548858 430 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AL161713.1-201ENST00000555538 145 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AL049872.1-201ENST00000556323 322 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC068714.1-201ENST00000559623 800 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 RN7SL230P-201ENST00000580835 303 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR4512-201ENST00000583257 77 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC010680.4-201ENST00000605334 543 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AC010857.1-201ENST00000606398 594 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AL096803.3-201ENST00000609032 532 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR8058-201ENST00000615737 89 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 AL356274.1-201ENST00000617064 410 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 MIR6849-201ENST00000618543 69 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 MFSD4BP1-201ENST00000513330 1552 ntBASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CHKB-CPT1BH3BT56 MFSD8-242ENST00000641690 4199 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RNA5SP319-201ENST00000362768 119 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 U3.3-201ENST00000362986 216 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 SNORA51.9-201ENST00000384295 124 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RNU1-149P-201ENST00000390870 161 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC226101.1-201ENST00000401483 387 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AL035696.2-201ENST00000407941 709 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 SNORA3C-201ENST00000408792 125 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RN7SKP285-201ENST00000410137 318 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RN7SKP167-201ENST00000411047 285 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC062016.2-201ENST00000420950 676 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 FAM96AP1-201ENST00000430879 482 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RPS17P8-201ENST00000434525 335 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 RPEP4-201ENST00000437636 602 ntBASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC2.39□□□□□ -2.03
CHKB-CPT1BH3BT56 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms