Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL034370.1-201ENST00000397254 1590 ntBASIC4.55□□□□□ -1.68
ATG4BQ9Y4P1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4BQ9Y4P1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4BQ9Y4P1 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4BQ9Y4P1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4BQ9Y4P1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
ATG4BQ9Y4P1 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.55□□□□□ -1.68
ATG4BQ9Y4P1 CASC19-206ENST00000641028 1430 ntBASIC4.55□□□□□ -1.68
ATG4BQ9Y4P1 PHKBP1-201ENST00000450951 1951 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 RNU6-532P-201ENST00000384318 107 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AL035419.1-201ENST00000397037 564 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AL359643.1-201ENST00000404109 423 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 Z86062.1-201ENST00000406773 777 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 U3.35-201ENST00000408405 208 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC114755.2-201ENST00000413520 361 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AL360081.1-201ENST00000428299 555 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 MTND2P21-201ENST00000436242 1042 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 MTCO3P43-201ENST00000440974 771 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC091685.2-201ENST00000454924 864 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC105233.1-201ENST00000498840 781 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 CDH12P2-201ENST00000504393 298 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 MTND2P31-201ENST00000512602 616 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC133555.2-201ENST00000550213 292 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AL049870.4-201ENST00000555741 486 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 BGLT3-201ENST00000564523 994 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 RN7SL802P-201ENST00000577858 299 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 SS18L2P2-201ENST00000583960 235 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 AL031320.1-201ENST00000604177 357 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 NCLP2-201ENST00000416078 1462 ntBASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4BQ9Y4P1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 RNA5SP191-201ENST00000362585 102 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 RNA5SP87-201ENST00000384155 118 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 RNU4-31P-201ENST00000384211 141 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC007559.1-201ENST00000428736 355 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 OR2B7P-201ENST00000429302 934 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC004938.1-201ENST00000438468 308 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 RPL7AP52-201ENST00000458096 790 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 BUD31P1-201ENST00000521828 359 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC023158.1-201ENST00000561632 1025 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC021483.2-201ENST00000567415 758 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 MIR4700-201ENST00000578311 74 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 MIR5699-201ENST00000578903 90 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 FAM27B-201ENST00000610601 213 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC011472.4-201ENST00000615848 491 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 AC015804.1-201ENST00000622935 435 ntBASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4BQ9Y4P1 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms