Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 A2MP1-204ENST00000566278 4130 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AC126755.2-208ENST00000327792 462 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AC138969.1-213ENST00000331436 462 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 Y_RNA.62-201ENST00000362840 99 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 ARL4AP5-201ENST00000404372 599 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AC016712.1-201ENST00000431088 378 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AC004938.1-201ENST00000438468 308 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 CYCSP42-201ENST00000450823 238 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 CCNHP1-201ENST00000513311 678 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 C1GALT1P3-201ENST00000522049 819 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 SNORD39.2-201ENST00000579995 76 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 RPL26P30-202ENST00000602923 645 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AL023583.1-201ENST00000607518 1143 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 AC004232.3-201ENST00000622977 525 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 ZFRP1-201ENST00000457579 2970 ntBASIC5.48□□□□□ -1.53
CLIP2Q9UDT6 SCN1A-220ENST00000641603 12506 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 DDX18P4-201ENST00000511690 1966 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AL136164.3-201ENST00000624429 3978 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 VN1R37P-201ENST00000419096 748 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 RPS27AP7-201ENST00000422792 455 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 RPEP3-201ENST00000425462 676 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 CNOT7P1-201ENST00000429006 852 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AC090142.1-201ENST00000465776 462 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 RPL36AP41-201ENST00000493820 306 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 MTND4LP2-201ENST00000502312 285 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 TCP11X3P-202ENST00000514289 1254 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AC025857.1-201ENST00000525252 377 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AP001781.1-201ENST00000530977 207 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 MIR5096-201ENST00000583713 70 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AC234782.5-201ENST00000617723 324 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 U3.53-201ENST00000628922 216 ntBASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP2Q9UDT6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.46□□□□□ -1.53
CLIP2Q9UDT6 ZNF137P-201ENST00000456718 1920 ntBASIC5.46□□□□□ -1.53
CLIP2Q9UDT6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.46□□□□□ -1.53
CLIP2Q9UDT6 AL121950.1-201ENST00000624993 2077 ntBASIC5.46□□□□□ -1.53
CLIP2Q9UDT6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 UGT2B26P-201ENST00000508672 1613 ntBASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 HMGB3P9-201ENST00000441799 583 ntBASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 OR7L1P-201ENST00000456181 380 ntBASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 AC104763.1-201ENST00000475274 360 ntBASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 DEFB109F-201ENST00000491870 277 ntBASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 RPS4XP18-201ENST00000495480 763 ntBASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 AC107918.3-201ENST00000533272 382 ntBASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 AC069061.3-201ENST00000582254 823 ntBASIC5.46□□□□□ -1.54
CLIP2Q9UDT6 AP001542.1-201ENST00000591314 200 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms