Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AC016712.1-201ENST00000431088 378 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 HMGB3P10-201ENST00000434734 572 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AL591623.2-201ENST00000449978 222 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 SCARNA10-201ENST00000459255 330 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 RNA5SP249-201ENST00000516127 99 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AC087477.6-201ENST00000559595 843 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 MIR4284-201ENST00000578924 81 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AC022387.2-201ENST00000604050 448 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AL049536.1-201ENST00000625043 744 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AL445487.1-201ENST00000415694 1580 ntBASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCF1Q9UBD9 AC135352.1-201ENST00000506173 1418 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 CASC19-206ENST00000641028 1430 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AC108467.2-201ENST00000617640 1597 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AC126755.2-208ENST00000327792 462 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AC138969.1-213ENST00000331436 462 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 RNU6-618P-201ENST00000363518 112 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AL607077.1-201ENST00000401718 499 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 DHFRP5-201ENST00000406944 564 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 OR5M12P-201ENST00000423388 929 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AC092447.2-201ENST00000435487 669 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 GTF3AP5-201ENST00000442645 697 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AL589765.3-201ENST00000446084 462 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 MTND2P28-201ENST00000457540 1044 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AC107015.1-201ENST00000466902 747 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 NDUFA5P9-201ENST00000472609 340 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 OR9N1P-201ENST00000491296 333 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AC098799.3-201ENST00000506095 438 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AC084783.1-201ENST00000565846 910 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AC115286.1-201ENST00000604298 434 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 AL359922.3-201ENST00000624779 1670 ntBASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.12□□□□□ -1.75
CLCF1Q9UBD9 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC087190.4-201ENST00000574616 8334 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC120338.1-201ENST00000625074 1541 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC126323.6-202ENST00000568092 3511 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 MT-RNR1-201ENST00000389680 954 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 SDHCP2-201ENST00000398565 501 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 OR1F12-201ENST00000402365 945 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC013470.3-201ENST00000420252 1194 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC007064.3-201ENST00000422608 359 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 NPM1P26-201ENST00000426339 738 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 RPL12P28-201ENST00000430852 489 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 RPL34P6-201ENST00000432390 345 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 MRPL48P1-201ENST00000445390 636 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC104651.2-201ENST00000447549 528 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms