Protein–RNA interactions for Protein: Q9P2K6

KLHL42, Kelch-like protein 42, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42Q9P2K6 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 SNORA48.10-201ENST00000516965 160 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 HMGN2P36-201ENST00000529541 409 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 CYCSP28-201ENST00000534284 321 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 ZNF322P1-201ENST00000568013 1209 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 HMGB2P1-201ENST00000591146 634 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 AC234772.3-201ENST00000602277 528 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 GAS5-AS1-201ENST00000602767 694 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 AC009220.3-201ENST00000604318 586 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 AL158163.2-201ENST00000619110 700 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 AC013470.4-201ENST00000619978 986 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 AC098679.5-201ENST00000624394 571 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 AC006927.4-201ENST00000639187 543 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.71□□□□□ -1.5
KLHL42Q9P2K6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC117529.2-201ENST00000512159 2068 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RNA5SP273-201ENST00000362484 113 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RNU1-150P-201ENST00000362491 162 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RN7SKP275-201ENST00000364626 301 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 Y_RNA.465-201ENST00000384293 102 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 SNORA70E-201ENST00000384492 135 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RNA5SP91-201ENST00000390902 119 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC004386.1-201ENST00000393214 761 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 TAF9BP1-201ENST00000396646 746 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AL023807.1-201ENST00000407932 359 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RN7SKP29-201ENST00000410957 272 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AL136133.1-201ENST00000413694 376 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AL354890.1-201ENST00000413730 346 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC004987.3-201ENST00000413879 771 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RPL22P18-201ENST00000417197 377 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RPL21P43-201ENST00000425440 472 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 PSMA2P3-201ENST00000429685 675 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 MOB1AP1-201ENST00000430903 535 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 OR7E116P-201ENST00000448529 957 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RPS23P9-201ENST00000448848 438 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC108463.1-201ENST00000450258 347 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC087385.1-201ENST00000475062 312 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 MTCO3P35-201ENST00000485582 781 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 NIP7P2-201ENST00000485801 544 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RN7SL170P-201ENST00000487098 295 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RN7SKP70-201ENST00000516655 271 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 RN7SKP277-201ENST00000516895 283 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 OR5AZ1P-201ENST00000527448 943 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC113194.1-201ENST00000606037 500 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC007349.4-201ENST00000608114 532 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC004948.1-201ENST00000609858 672 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AC103703.1-201ENST00000634783 663 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 OR11H2-202ENST00000641517 1085 ntBASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
KLHL42Q9P2K6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms