Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AL022401.1-201ENST00000619498 108 ntBASIC4.84□□□□□ -1.63
HACD3Q9P035 AC140113.4-201ENST00000622087 222 ntBASIC4.84□□□□□ -1.63
HACD3Q9P035 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HACD3Q9P035 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HACD3Q9P035 TLK1P1-201ENST00000456760 2440 ntBASIC4.84□□□□□ -1.64
HACD3Q9P035 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HACD3Q9P035 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
HACD3Q9P035 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
HACD3Q9P035 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.84□□□□□ -1.64
HACD3Q9P035 NCLP2-201ENST00000416078 1462 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HACD3Q9P035 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.83□□□□□ -1.64
HACD3Q9P035 AC092435.4-201ENST00000623012 4159 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.83□□□□□ -1.64
HACD3Q9P035 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.83□□□□□ -1.64
HACD3Q9P035 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HACD3Q9P035 IL6STP1-201ENST00000346911 1020 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 RNU6-1251P-201ENST00000364502 107 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.83□□□□□ -1.64
HACD3Q9P035 SNORA51.8-201ENST00000384234 132 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 SNORA68.2-201ENST00000391263 128 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HACD3Q9P035 AL592291.1-201ENST00000403830 352 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 AC009237.10-201ENST00000414112 510 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 RGS17P1-201ENST00000423358 553 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 RPS27P18-201ENST00000431701 247 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 PSMD10P3-201ENST00000437000 448 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.83□□□□□ -1.64
HACD3Q9P035 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.83□□□□□ -1.64
HACD3Q9P035 HMGB3P9-201ENST00000441799 583 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 AC073648.4-201ENST00000442655 781 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 AL157884.3-201ENST00000448273 1184 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 BUD31P2-201ENST00000449374 300 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 HIGD1AP8-201ENST00000453927 274 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 AP002345.1-201ENST00000456493 928 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.83□□□□□ -1.64
HACD3Q9P035 RWDD4P1-201ENST00000488019 565 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.83□□□□□ -1.64
HACD3Q9P035 FABP5P6-201ENST00000510588 409 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.83□□□□□ -1.64
HACD3Q9P035 AF186190.1-201ENST00000517470 480 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 AP001922.4-201ENST00000526967 290 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
HACD3Q9P035 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.83□□□□□ -1.64
HACD3Q9P035 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.83□□□□□ -1.64
HACD3Q9P035 AC009117.1-201ENST00000563948 554 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HACD3Q9P035 RN7SL802P-201ENST00000577858 299 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 AC022726.1-201ENST00000587475 207 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.83□□□□□ -1.64
HACD3Q9P035 AL137072.1-201ENST00000603444 466 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.83□□□□□ -1.64
HACD3Q9P035 AC133644.2-201ENST00000608142 540 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.83□□□□□ -1.64
HACD3Q9P035 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.83□□□□□ -1.64
HACD3Q9P035 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.83□□□□□ -1.64
HACD3Q9P035 AL356490.1-201ENST00000623079 479 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 AP003499.2-201ENST00000624100 483 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 AC011815.3-201ENST00000624194 473 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HACD3Q9P035 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HACD3Q9P035 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HACD3Q9P035 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.83□□□□□ -1.64
HACD3Q9P035 OR14L1P-202ENST00000641545 3009 ntBASIC4.83□□□□□ -1.64
HACD3Q9P035 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
HACD3Q9P035 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HACD3Q9P035 SAMMSON-226ENST00000642089 1582 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HACD3Q9P035 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HACD3Q9P035 AL121950.1-201ENST00000624993 2077 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HACD3Q9P035 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HACD3Q9P035 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.82□□□□□ -1.64
HACD3Q9P035 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.82□□□□□ -1.64
HACD3Q9P035 MAPK10-303ENST00000641324 3959 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HACD3Q9P035 AC008549.2-201ENST00000333482 706 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 SNORA40.4-201ENST00000390971 128 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 U3.30-201ENST00000391308 210 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HACD3Q9P035 AL357078.2-201ENST00000416486 427 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 CYCSP10-201ENST00000417973 294 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 GLUD1P9-201ENST00000420997 1173 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.82□□□□□ -1.64
HACD3Q9P035 AL590762.3-201ENST00000436372 640 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.82□□□□□ -1.64
HACD3Q9P035 RPL31P44-201ENST00000447680 377 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 OR1H1P-201ENST00000448731 937 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.82□□□□□ -1.64
HACD3Q9P035 AC104971.1-201ENST00000495117 578 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.82□□□□□ -1.64
HACD3Q9P035 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HACD3Q9P035 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HACD3Q9P035 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HACD3Q9P035 SETP12-201ENST00000514068 805 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 RNU6-889P-201ENST00000517189 103 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 MORF4L1P3-201ENST00000525966 950 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 AC133555.2-201ENST00000550213 292 ntBASIC4.82□□□□□ -1.64
HACD3Q9P035 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.82□□□□□ -1.64
HACD3Q9P035 LINC00557-201ENST00000563184 1279 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms