Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC027544.3-201ENST00000535082 757 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC100767.2-201ENST00000604840 693 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC067838.1-201ENST00000606064 577 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC084824.5-201ENST00000612009 413 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC006249.1-201ENST00000621223 471 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC099494.2-201ENST00000623371 978 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 NXF4-202ENST00000416098 1465 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 RNA5SP22-201ENST00000365393 109 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 RN7SKP126-201ENST00000411143 300 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 CDY17P-201ENST00000414121 1282 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AC016769.2-201ENST00000414815 475 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 ATG4AP1-201ENST00000416893 538 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 GTF3AP1-201ENST00000416942 1004 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 MTND2P9-201ENST00000422293 931 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 RPL21P43-201ENST00000425440 472 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 RPL21P91-201ENST00000429231 479 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 RPL23AP25-201ENST00000430973 463 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 MTND2P21-201ENST00000436242 1042 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AL353748.1-201ENST00000440753 474 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 XKRY2-201ENST00000442362 1093 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AC073109.1-201ENST00000445066 978 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 RPS26P41-201ENST00000450370 284 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AC007998.1-201ENST00000474156 672 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AC008897.1-201ENST00000494006 347 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AC006499.6-201ENST00000511169 607 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 RNA5SP446-201ENST00000515955 82 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 RNA5SP43-201ENST00000516559 110 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 NANOGNBP2-201ENST00000544753 553 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 HMGB3P26-201ENST00000560051 582 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AC106785.3-201ENST00000564064 847 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AL139395.1-201ENST00000603662 160 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AP000240.1-201ENST00000609910 452 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 CR381572.2-201ENST00000624852 397 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AC097372.4-201ENST00000625025 466 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 CASC19-222ENST00000641321 1173 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.53□□□□□ -1.68
NDE1Q9NXR1 AC015813.6-201ENST00000624409 5808 ntBASIC4.53□□□□□ -1.68
NDE1Q9NXR1 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
NDE1Q9NXR1 RLIMP2-201ENST00000427891 1563 ntBASIC4.53□□□□□ -1.69
NDE1Q9NXR1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.69
NDE1Q9NXR1 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
NDE1Q9NXR1 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.53□□□□□ -1.69
NDE1Q9NXR1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AL592494.2-201ENST00000425455 1548 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 RNA5SP132-201ENST00000364725 118 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.52□□□□□ -1.69
NDE1Q9NXR1 MTND4P24-201ENST00000424002 397 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 CENPIP1-201ENST00000425713 902 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 SKP1P3-201ENST00000429280 487 ntBASIC4.52□□□□□ -1.69
NDE1Q9NXR1 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms