Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 MTND4P35-201ENST00000604257 1375 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 RBPJP7-201ENST00000442803 1447 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 RBPJP5-201ENST00000449433 1447 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 MTCO1P7-201ENST00000419523 1542 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AP000473.2-201ENST00000602659 1537 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 LINC00561-201ENST00000565815 2738 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 RN7SKP107-201ENST00000364157 290 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 RNU6-359P-201ENST00000365466 108 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 SNORA11C-201ENST00000408532 129 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 RNU6-195P-201ENST00000411352 109 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AL662791.3-201ENST00000413771 776 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 SPA17P1-201ENST00000416656 452 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 FAM183DP-201ENST00000421987 399 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 LYPLA1P1-201ENST00000434514 622 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 NPM1P39-201ENST00000449818 867 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 PPIAP32-201ENST00000449940 472 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC005517.1-201ENST00000452091 489 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AL606490.1-201ENST00000452266 765 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC099563.1-201ENST00000456086 418 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 RNU6-261P-201ENST00000459506 102 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 HMGN2P26-201ENST00000463169 339 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 RN7SL160P-201ENST00000468558 284 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AL135752.1-201ENST00000479477 471 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 OR7E99P-201ENST00000505750 922 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC112206.3-201ENST00000514578 389 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AP003122.3-201ENST00000526316 255 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AP000790.1-201ENST00000528891 737 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC023050.3-201ENST00000541142 333 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 MIR4310-201ENST00000582950 57 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 COX6CP16-201ENST00000603667 216 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AL359999.1-201ENST00000604513 294 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 Z84480.1-201ENST00000605131 311 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC103710.4-201ENST00000609301 899 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AC005618.4-201ENST00000625053 554 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 MKKS-204ENST00000639674 192 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 OR7E161P-202ENST00000641994 1033 ntBASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CUEDC1Q9NWM3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.9□□□□□ -1.31
CUEDC1Q9NWM3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CUEDC1Q9NWM3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CUEDC1Q9NWM3 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.9□□□□□ -1.31
CUEDC1Q9NWM3 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 RNU6-702P-201ENST00000364982 107 ntBASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 RPS3AP5-201ENST00000389400 821 ntBASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 TMBIM7P-201ENST00000418074 855 ntBASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 RAD23BP1-201ENST00000421404 1227 ntBASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 RPL7P57-201ENST00000423238 740 ntBASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 AL513175.1-201ENST00000431492 780 ntBASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 CBX1P4-201ENST00000439415 457 ntBASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 CBX1P1-201ENST00000440184 427 ntBASIC6.89□□□□□ -1.31
CUEDC1Q9NWM3 AC009237.4-201ENST00000441078 238 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms