Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AP000827.1-201ENST00000527814 258 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AC100770.1-201ENST00000532310 322 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AC090312.1-201ENST00000580637 348 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 MIR4270-201ENST00000581799 70 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 MIR6780A-201ENST00000615089 68 ntBASIC4.48□□□□□ -1.69
TREX1Q9NSU2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TREX1Q9NSU2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 ASNSP1-201ENST00000518311 1939 ntBASIC4.47□□□□□ -1.69
TREX1Q9NSU2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 RNVU1-6-201ENST00000364688 164 ntBASIC4.47□□□□□ -1.69
TREX1Q9NSU2 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 NPM1P26-201ENST00000426339 738 ntBASIC4.47□□□□□ -1.69
TREX1Q9NSU2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 AL513533.1-201ENST00000453728 415 ntBASIC4.47□□□□□ -1.69
TREX1Q9NSU2 RPL35AP28-201ENST00000459730 331 ntBASIC4.47□□□□□ -1.69
TREX1Q9NSU2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 AL160290.3-201ENST00000604869 165 ntBASIC4.47□□□□□ -1.69
TREX1Q9NSU2 OR7M1P-201ENST00000608946 533 ntBASIC4.47□□□□□ -1.69
TREX1Q9NSU2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 AC007546.2-201ENST00000623996 360 ntBASIC4.47□□□□□ -1.69
TREX1Q9NSU2 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 AC017104.4-201ENST00000636283 1592 ntBASIC4.47□□□□□ -1.69
TREX1Q9NSU2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.47□□□□□ -1.69
TREX1Q9NSU2 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
TREX1Q9NSU2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TREX1Q9NSU2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.46□□□□□ -1.69
TREX1Q9NSU2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 PDSS1P1-201ENST00000422953 1114 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 RPS12P10-201ENST00000427031 377 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 SKP1P3-201ENST00000429280 487 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 RPEP2-201ENST00000432149 701 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC243772.1-201ENST00000451620 410 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 MTND6P32-201ENST00000457611 483 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC024940.4-201ENST00000605507 246 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC020634.1-201ENST00000608701 549 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC100847.1-201ENST00000611316 481 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AL133243.1-201ENST00000614487 366 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC009950.2-201ENST00000636548 183 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 LINC01808-202ENST00000641680 1116 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC138627.1-204ENST00000641894 765 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 AC090971.4-201ENST00000560291 1800 ntBASIC4.46□□□□□ -1.7
TREX1Q9NSU2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TREX1Q9NSU2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 OR13C3-201ENST00000374781 1108 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 AL133270.1-201ENST00000402635 279 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 RNU2-50P-201ENST00000410494 143 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.45□□□□□ -1.7
TREX1Q9NSU2 CENPIP1-201ENST00000425713 902 ntBASIC4.45□□□□□ -1.7
TREX1Q9NSU2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms