Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC012671.1-201ENST00000451912 203 ntBASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 RN7SKP46-201ENST00000515942 234 ntBASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 HMGB2P1-201ENST00000591146 634 ntBASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 ARF4P1-201ENST00000605447 541 ntBASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 AC015922.4-201ENST00000612568 690 ntBASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 MIR331-201ENST00000362302 94 ntBASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 CYCSP28-201ENST00000534284 321 ntBASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 AC084783.1-201ENST00000565846 910 ntBASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 MIR1254-2-201ENST00000579553 63 ntBASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 RN7SL435P-201ENST00000584418 282 ntBASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 AC006065.6-201ENST00000625201 545 ntBASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 AC073869.7-201ENST00000640874 297 ntBASIC3.96□□□□□ -1.77
KIAA1549Q9HCM3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AC012078.1-201ENST00000405035 1646 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 SMG1P4-204ENST00000523028 4131 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 RNA5SP28-201ENST00000363841 119 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 MIR3065-201ENST00000390137 79 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AL356967.1-201ENST00000406305 431 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AC114495.1-201ENST00000441274 436 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AC090013.1-201ENST00000485147 480 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AC093824.1-201ENST00000508796 343 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 SNORA31.9-201ENST00000516429 84 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 TOMM20P2-201ENST00000540082 421 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 VN1R85P-201ENST00000601587 426 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AC092653.1-201ENST00000608509 531 ntBASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KIAA1549Q9HCM3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KIAA1549Q9HCM3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms