Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 RNA5SP154-201ENST00000516193 111 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 AC010857.1-201ENST00000606398 594 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 AL627230.1-201ENST00000613077 211 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 MLECP1-201ENST00000615893 709 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 AL591926.8-201ENST00000616876 211 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 AL669942.2-201ENST00000620352 697 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM4Q9C037 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM4Q9C037 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM4Q9C037 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TRIM4Q9C037 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM4Q9C037 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM4Q9C037 ASNSP1-204ENST00000641977 1664 ntBASIC4.77□□□□□ -1.65
TRIM4Q9C037 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 RNA5SP191-201ENST00000362585 102 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 SNORA77-201ENST00000408716 125 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC004552.1-201ENST00000419089 348 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 CKS1BP6-201ENST00000424932 240 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 RPS29P9-201ENST00000440360 171 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 TXNP5-201ENST00000441043 315 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 RPS26P3-201ENST00000470205 348 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 RPL23AP2-201ENST00000471227 466 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC090543.2-201ENST00000483963 348 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC004057.1-201ENST00000485827 348 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 RPL21P129-201ENST00000491732 478 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 RPS4XP18-201ENST00000495480 763 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 COX6B1P5-201ENST00000509843 249 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 AP002981.1-201ENST00000517692 975 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC021483.2-201ENST00000567415 758 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC008638.3-201ENST00000603341 463 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 AC019193.2-201ENST00000610012 634 ntBASIC4.76□□□□□ -1.65
TRIM4Q9C037 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM4Q9C037 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM4Q9C037 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM4Q9C037 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM4Q9C037 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM4Q9C037 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM4Q9C037 CASC19-206ENST00000641028 1430 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM4Q9C037 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM4Q9C037 RNA5SP515-201ENST00000364570 118 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 TRAV35-201ENST00000390462 330 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 ATP5HP3-201ENST00000396994 486 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 AC025750.1-201ENST00000399891 379 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 RN7SKP114-201ENST00000410327 279 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM4Q9C037 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM4Q9C037 AC104306.1-201ENST00000449702 371 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM4Q9C037 AL691482.1-201ENST00000453255 87 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM4Q9C037 RN7SKP260-201ENST00000516907 149 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 AC012339.2-201ENST00000523996 453 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM4Q9C037 AC005868.1-201ENST00000536421 331 ntBASIC4.75□□□□□ -1.65
TRIM4Q9C037 AL049830.4-201ENST00000555149 351 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms