Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZSWIM5P3-201ENST00000511265 2743 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC090337.1-201ENST00000579651 2074 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 OR4A15-201ENST00000314706 1035 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 Y_RNA.135-201ENST00000363439 95 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 Y_RNA.148-201ENST00000363557 117 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 RPL7P57-201ENST00000423238 740 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AL669831.1-202ENST00000428504 417 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AL353754.1-201ENST00000440219 340 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 HIGD1AP16-201ENST00000450986 258 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 HIGD1AP8-201ENST00000453927 274 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AL133445.1-201ENST00000467051 452 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 RN7SL705P-201ENST00000481678 294 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC108693.1-201ENST00000496068 432 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC008953.1-201ENST00000497334 318 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC024558.1-201ENST00000505008 528 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 RNA5SP206-201ENST00000516703 121 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC009812.2-201ENST00000517657 457 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 CDC42P3-201ENST00000518493 633 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 RPL10P18-201ENST00000519384 309 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 ST13P6-201ENST00000522430 1102 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 RBM22P12-201ENST00000567098 1255 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC020914.7-201ENST00000594477 545 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC103710.4-201ENST00000609301 899 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 FAM157A-202ENST00000615155 405 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC244517.12-201ENST00000623581 663 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC138409.1-201ENST00000505001 3598 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 CASC19-205ENST00000641013 1411 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 NACA-216ENST00000550952 2922 ntTSL 2 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 AC023421.1-201ENST00000590535 1785 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 HYDIN2-203ENST00000614586 13885 ntBASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL25A1Q9BXS0 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 OR13C1P-202ENST00000641378 2919 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC073349.2-201ENST00000427545 1603 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 Y_RNA.158-201ENST00000363651 101 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 MIR548I2-201ENST00000408348 149 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 RNU6-261P-201ENST00000459506 102 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 RN7SL834P-201ENST00000461450 286 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC006463.2-201ENST00000473326 348 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC138409.2-202ENST00000507274 458 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC093303.1-201ENST00000514549 295 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 RNA5SP401-201ENST00000515920 127 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 RNU6-764P-201ENST00000516396 105 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 RNU6-1314P-201ENST00000517139 104 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 PTP4A1P6-201ENST00000531034 478 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC090236.2-201ENST00000587933 1101 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AL953862.2-201ENST00000603089 820 ntBASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.81□□□□□ -1.32
COL25A1Q9BXS0 AC015922.4-201ENST00000612568 690 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms