Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 RNU1-32P-201ENST00000363937 159 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AL359643.1-201ENST00000404109 423 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 RPL5P19-201ENST00000404228 893 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AL512430.2-201ENST00000406786 339 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 MIR1271-201ENST00000408537 86 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 ELOCP19-201ENST00000411919 318 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AL807761.1-201ENST00000417622 171 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 NDUFA5P1-201ENST00000433858 341 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 RPL23AP93-201ENST00000440847 484 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 CYCSP42-201ENST00000450823 238 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AL445433.1-201ENST00000457507 257 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 HMGB1P19-201ENST00000517578 577 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AC022882.1-201ENST00000532142 501 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 SULT1C2P2-201ENST00000562517 294 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AC022106.2-201ENST00000620114 757 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 UGT2B26P-201ENST00000508672 1613 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AL137100.1-201ENST00000556703 1620 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AC104118.1-201ENST00000607625 1589 ntBASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ECHDC3Q96DC8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AL133268.1-201ENST00000405676 1401 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 FAR2P2-201ENST00000413041 594 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 RPL7AP25-201ENST00000423357 805 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 FAR2P4-202ENST00000425399 584 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 CENPIP1-201ENST00000425713 902 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AP001324.1-201ENST00000428553 399 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 PTMAP3-201ENST00000447474 330 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 snoU13.1-201ENST00000459157 104 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AC108751.2-201ENST00000469993 231 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AC113430.1-201ENST00000506872 718 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 ADAD1P2-201ENST00000588476 646 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 BPIFA4P-203ENST00000603168 689 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 SNORA35B-201ENST00000607417 129 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AC012409.3-201ENST00000611343 981 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AC004241.3-201ENST00000611728 517 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 MIR7641-1-201ENST00000627518 61 ntBASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ECHDC3Q96DC8 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AC010132.2-201ENST00000295493 1043 ntBASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.55□□□□□ -1.68
ECHDC3Q96DC8 AC068287.1-201ENST00000430283 295 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms